mm9_v1_chr19_+_20676453_20676504	23.9079	POU5F1_SOX2{dimer}.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr3_-_113280650_113280667	14.9038	POU5F1_SOX2{dimer}.p2	BC009121|Amy1|11722|amylase 1, salivary	V00717|Amy1|11722|amylase 1, salivary	NM_001110505|Amy1|11722|amylase 1, salivary	V00720|Amy1|11722|amylase 1, salivary
mm9_v1_chr6_+_70676428_70676433	13.0888	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr6_+_70676803_70676846	12.8527	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr14_+_45119792_45119792	12.824	POU5F1_SOX2{dimer}.p2	BC061237|BC061237|385138|cDNA sequence BC061237	NM_198677|BC061237|385138|cDNA sequence BC061237
mm9_v1_chr7_+_23656242_23656242	12.6416	POU5F1_SOX2{dimer}.p2	NM_001166724|Vmn1r160|620758|vomeronasal 1 receptor 160
mm9_v1_chr17_-_25218117_25218141	12.4413	POU5F1_SOX2{dimer}.p2	AK146008|Tmem204|407831|transmembrane protein 204
mm9_v1_chr16_+_35001358_35001362	11.3595	POU5F1_SOX2{dimer}.p2	AK171889|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr9_-_54509453_54509528	11.1985	POU5F1_SOX2{dimer}.p2	AK129179|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1	BC057322|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1	AK054103|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1
mm9_v1_chr9_-_54509658_54509691	11.0406	POU5F1_SOX2{dimer}.p2	AB050554|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1	NM_053178|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1
mm9_v1_chr2_+_25036524_25036678	10.4435	POU5F1_SOX2{dimer}.p2	BC069891|Nrarp|67122|Notch-regulated ankyrin repeat protein	AK012426|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr7_-_110962416_110962439	10.241	POU5F1_SOX2{dimer}.p2	BC027434|Hbb-b2|15130|hemoglobin, beta adult minor chain	BC032264|Hbb-b2|15130|hemoglobin, beta adult minor chain	NM_016956|Hbb-b2|15130|hemoglobin, beta adult minor chain	AK168412|Hbb-b1|15129|hemoglobin, beta adult major chain	AK002394|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005496|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011033|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011050|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011052|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011057|Hbb-b1|15129|hemoglobin, beta adult major chain	AK012551|Hbb-b1|15129|hemoglobin, beta adult major chain	AK167615|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168477|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168584|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168819|Hbb-b1|15129|hemoglobin, beta adult major chain	AK028067|Hbb-b1|15129|hemoglobin, beta adult major chain	NM_008220|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr7_+_147949637_147949642	9.92824	POU5F1_SOX2{dimer}.p2	L11650|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1
mm9_v1_chr3_+_90346956_90347018	9.84875	POU5F1_SOX2{dimer}.p2	AK002991|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr19_+_30020236_30020283	9.70281	POU5F1_SOX2{dimer}.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chr7_+_23307985_23307985	9.28103	POU5F1_SOX2{dimer}.p2	NM_001166738|Vmn1r104|667135|vomeronasal 1 receptor 104	NM_001166752|Vmn1r152|667504|vomeronasal 1 receptor 152
mm9_v1_chr2_+_25036276_25036300	9.25888	POU5F1_SOX2{dimer}.p2	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr7_-_22331108_22331108	9.07242	POU5F1_SOX2{dimer}.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr7_+_21119185_21119185	9.03607	POU5F1_SOX2{dimer}.p2	NM_001166738|Vmn1r104|667135|vomeronasal 1 receptor 104	NM_001166752|Vmn1r152|667504|vomeronasal 1 receptor 152
mm9_v1_chr3_+_97432726_97432760	8.8481	POU5F1_SOX2{dimer}.p2	AK162951|Fmo5|14263|flavin containing monooxygenase 5	NM_001161763|Fmo5|14263|flavin containing monooxygenase 5	AK147040|Fmo5|14263|flavin containing monooxygenase 5	NM_001161765|Fmo5|14263|flavin containing monooxygenase 5	NM_010232|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr7_+_21947203_21947203	8.82638	POU5F1_SOX2{dimer}.p2	NM_001166707|Vmn1r123|384695|vomeronasal 1 receptor 123
mm9_v1_chr7_+_147949708_147949754	8.55086	POU5F1_SOX2{dimer}.p2	BC013451|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	NM_021282|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	DQ838976|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	DQ838977|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	X62595|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	BC042693|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1
mm9_v1_chr7_-_23477335_23477335	8.40656	POU5F1_SOX2{dimer}.p2	NM_001167154|Gm8693|667543|predicted gene 8693	NM_001167155|Gm4144|100042980|predicted gene 4144
mm9_v1_chr7_-_21288567_21288567	8.3675	POU5F1_SOX2{dimer}.p2	NM_001167154|Gm8693|667543|predicted gene 8693	NM_001167155|Gm4144|100042980|predicted gene 4144
mm9_v1_chr11_-_51807636_51807676	8.32951	POU5F1_SOX2{dimer}.p2	AK017280|5430406J06Rik|73848|RIKEN cDNA 5430406J06 gene
mm9_v1_chr18_+_80315134_80315153	8.00902	POU5F1_SOX2{dimer}.p2	AK010699|Pard6g|93737|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm9_v1_chr7_+_22057197_22057197	7.92605	POU5F1_SOX2{dimer}.p2	NM_001166740|Vmn1r125|667215|vomeronasal 1 receptor 125
mm9_v1_chr7_-_24036700_24036700	7.91553	POU5F1_SOX2{dimer}.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr7_-_21488234_21488234	7.91553	POU5F1_SOX2{dimer}.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr7_+_22399110_22399110	7.70884	POU5F1_SOX2{dimer}.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_23546715_23546715	7.70884	POU5F1_SOX2{dimer}.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr7_+_21556203_21556203	7.70884	POU5F1_SOX2{dimer}.p2	NM_001166847|Vmn1r112|100043569|vomeronasal 1 receptor 112
mm9_v1_chr7_+_22881885_22881885	7.70884	POU5F1_SOX2{dimer}.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_21357946_21357946	7.69307	POU5F1_SOX2{dimer}.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr7_+_22296798_22296798	7.64921	POU5F1_SOX2{dimer}.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_23198601_23198601	7.59321	POU5F1_SOX2{dimer}.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr2_+_136539143_136539198	7.57298	POU5F1_SOX2{dimer}.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr7_+_21003290_21003290	7.56695	POU5F1_SOX2{dimer}.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr8_-_48374715_48374736	7.55977	POU5F1_SOX2{dimer}.p2	AK129346|Stox2|71069|storkhead box 2
mm9_v1_chr7_-_22813915_22813915	7.50191	POU5F1_SOX2{dimer}.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr5_+_93327023_93327086	7.47264	POU5F1_SOX2{dimer}.p2	NM_001077596|Shroom3|27428|shroom family member 3	AK147493|Shroom3|27428|shroom family member 3
mm9_v1_chr9_+_43901941_43901990	7.36147	POU5F1_SOX2{dimer}.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr6_-_48658182_48658205	7.35867	POU5F1_SOX2{dimer}.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr9_+_57862803_57862823	7.30529	POU5F1_SOX2{dimer}.p2	AK077945|Cyp11a1|13070|cytochrome P450, family 11, subfamily a, polypeptide 1	BC068264|Cyp11a1|13070|cytochrome P450, family 11, subfamily a, polypeptide 1	AF195119|Cyp11a1|13070|cytochrome P450, family 11, subfamily a, polypeptide 1	NM_019779|Cyp11a1|13070|cytochrome P450, family 11, subfamily a, polypeptide 1
mm9_v1_chr7_-_110962324_110962382	7.15138	POU5F1_SOX2{dimer}.p2	AB020013|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020015|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020017|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB364477|Hbb-b1|15129|hemoglobin, beta adult major chain	AB364478|Hbb-b2|15130|hemoglobin, beta adult minor chain	AF149782|Hbb-b2|15130|hemoglobin, beta adult minor chain
mm9_v1_chr7_+_23840558_23840558	6.97459	POU5F1_SOX2{dimer}.p2	NM_001166747|Vmn1r135|667404|vomeronasal 1 receptor 135	NM_001166755|Vmn1r163|667586|vomeronasal 1 receptor 163
mm9_v1_chr9_+_46036703_46036712	6.92361	POU5F1_SOX2{dimer}.p2	NM_009692|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr10_+_56097078_56097350	6.86585	POU5F1_SOX2{dimer}.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr7_+_24002350_24002350	6.85645	POU5F1_SOX2{dimer}.p2	BC154405|Vmn1r178|232959|vomeronasal 1 receptor 178	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_22779605_22779605	6.85645	POU5F1_SOX2{dimer}.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_21453935_21453935	6.83778	POU5F1_SOX2{dimer}.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_23443036_23443036	6.83778	POU5F1_SOX2{dimer}.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr7_+_21254266_21254266	6.83778	POU5F1_SOX2{dimer}.p2	NM_001166753|Vmn1r155|667530|vomeronasal 1 receptor 155	NM_001166759|Vmn1r107|673977|vomeronasal 1 receptor 107	NM_001166846|Vmn1r110|100043561|vomeronasal 1 receptor 110	NM_001166848|Vmn1r130|100043596|vomeronasal 1 receptor 130	NM_001166849|Vmn1r137|100043614|vomeronasal 1 receptor 137	NM_001166850|Vmn1r165|100043667|vomeronasal 1 receptor 165
mm9_v1_chr8_-_95803605_95803656	6.83128	POU5F1_SOX2{dimer}.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr9_+_98323379_98323379	6.81897	POU5F1_SOX2{dimer}.p2	NM_011254|Rbp1|19659|retinol binding protein 1, cellular	X60367|Rbp1|19659|retinol binding protein 1, cellular
mm9_v1_chr7_+_22974395_22974395	6.8085	POU5F1_SOX2{dimer}.p2	NM_001166750|Vmn1r143|667469|vomeronasal 1 receptor 143	NM_001167538|Vmn1r95|100312475|vomeronasal 1 receptor, 95
mm9_v1_chr2_+_136539202_136539314	6.69708	POU5F1_SOX2{dimer}.p2	AK138653|Snap25|20614|synaptosomal-associated protein 25	AK161896|Snap25|20614|synaptosomal-associated protein 25	M22012|Snap25|20614|synaptosomal-associated protein 25	BC018249|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr7_+_137836279_137836292	6.64689	POU5F1_SOX2{dimer}.p2	AK165603|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr10_-_76188683_76188791	6.64667	POU5F1_SOX2{dimer}.p2	AK052924|Col6a1|12833|collagen, type VI, alpha 1	NM_009933|Col6a1|12833|collagen, type VI, alpha 1	X66405|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr9_+_46036788_46036792	6.59929	POU5F1_SOX2{dimer}.p2	AK076187|Apoa1|11806|apolipoprotein A-I	AK131864|Apoa1|11806|apolipoprotein A-I	AK149576|Apoa1|11806|apolipoprotein A-I	AK161536|Apoa1|11806|apolipoprotein A-I	X64262|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr6_+_4484651_4484672	6.5766	POU5F1_SOX2{dimer}.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr18_+_20469364_20469373	6.53513	POU5F1_SOX2{dimer}.p2	BC154410|Dsg1a|13510|desmoglein 1 alpha	NM_010079|Dsg1a|13510|desmoglein 1 alpha
mm9_v1_chr7_+_20779058_20779058	6.53069	POU5F1_SOX2{dimer}.p2	NM_001166750|Vmn1r143|667469|vomeronasal 1 receptor 143	NM_001167538|Vmn1r95|100312475|vomeronasal 1 receptor, 95
mm9_v1_chr8_+_56040080_56040120	6.52024	POU5F1_SOX2{dimer}.p2	NM_153581|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr2_+_20431673_20431673	6.40696	POU5F1_SOX2{dimer}.p2	AB125594|Etl4|208618|enhancer trap locus 4	AB125595|Etl4|208618|enhancer trap locus 4	NM_029895|Etl4|208618|enhancer trap locus 4	NM_178059|Etl4|208618|enhancer trap locus 4
mm9_v1_chr19_-_40346058_40346105	6.28067	POU5F1_SOX2{dimer}.p2	AK158992|Pdlim1|54132|PDZ and LIM domain 1 (elfin)	NM_016861|Pdlim1|54132|PDZ and LIM domain 1 (elfin)
mm9_v1_chr13_-_61141957_61141985	6.08608	POU5F1_SOX2{dimer}.p2	AY014776|Ctsq|104002|cathepsin Q	NM_029636|Ctsq|104002|cathepsin Q	BC099415|Ctsq|104002|cathepsin Q	AF456461|Ctsq|104002|cathepsin Q
mm9_v1_chr7_+_137836116_137836140	6.0569	POU5F1_SOX2{dimer}.p2	AK165194|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr1_+_58086804_58086818	5.96461	POU5F1_SOX2{dimer}.p2	AK137697|Aox1|11761|aldehyde oxidase 1	NM_009676|Aox1|11761|aldehyde oxidase 1
mm9_v1_chrX_+_54032858_54032889	5.92136	POU5F1_SOX2{dimer}.p2	NM_001077362|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr6_+_70648433_70648461	5.91254	POU5F1_SOX2{dimer}.p2	M83099|Igkv3-2|626583|immunoglobulin kappa variable 3-2
mm9_v1_chrX_+_54032914_54032920	5.83376	POU5F1_SOX2{dimer}.p2	BC029024|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr1_+_58086831_58086847	5.81282	POU5F1_SOX2{dimer}.p2	BC026132|Aox1|11761|aldehyde oxidase 1	AF076216|Aox1|11761|aldehyde oxidase 1
mm9_v1_chr9_+_72596925_72596929	5.73501	POU5F1_SOX2{dimer}.p2	AK195685|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr7_-_21697365_21697365	5.69611	POU5F1_SOX2{dimer}.p2	NM_001166742|Vmn1r118|667259|vomeronasal 1 receptor 118	NM_001167150|Gm8453|667094|predicted gene 8453	NM_001167151|Gm4498|100043523|predicted gene 4498
mm9_v1_chr7_-_20819176_20819176	5.5581	POU5F1_SOX2{dimer}.p2	NM_001166742|Vmn1r118|667259|vomeronasal 1 receptor 118	NM_001167150|Gm8453|667094|predicted gene 8453	NM_001167151|Gm4498|100043523|predicted gene 4498
mm9_v1_chr7_+_125740810_125740810	5.53941	POU5F1_SOX2{dimer}.p2	AK028404|Tmc5|74424|transmembrane channel-like gene family 5	NM_001105252|Tmc5|74424|transmembrane channel-like gene family 5
mm9_v1_chr16_+_92086695_92086827	5.53479	POU5F1_SOX2{dimer}.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr6_+_129543505_129543505	5.47457	POU5F1_SOX2{dimer}.p2	AF030311|Klrd1|16643|killer cell lectin-like receptor, subfamily D, member 1	AF057714|Klrd1|16643|killer cell lectin-like receptor, subfamily D, member 1	NM_010654|Klrd1|16643|killer cell lectin-like receptor, subfamily D, member 1
mm9_v1_chr6_+_48634586_48634593	5.33145	POU5F1_SOX2{dimer}.p2	BC005577|Gimap4|107526|GTPase, IMAP family member 4
mm9_v1_chr7_-_23014502_23014502	5.31514	POU5F1_SOX2{dimer}.p2	NM_001166742|Vmn1r118|667259|vomeronasal 1 receptor 118	NM_001167150|Gm8453|667094|predicted gene 8453	NM_001167151|Gm4498|100043523|predicted gene 4498
mm9_v1_chr4_+_98213324_98213424	5.30782	POU5F1_SOX2{dimer}.p2	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr7_+_21657274_21657274	5.22804	POU5F1_SOX2{dimer}.p2	NM_001166744|Vmn1r116|667268|vomeronasal 1 receptor 116
mm9_v1_chr6_+_48634576_48634582	5.1064	POU5F1_SOX2{dimer}.p2	NM_174990|Gimap4|107526|GTPase, IMAP family member 4	NM_175048|Gimap4|107526|GTPase, IMAP family member 4	AK088228|Gimap4|107526|GTPase, IMAP family member 4
mm9_v1_chr3_+_129539656_129539716	5.0085	POU5F1_SOX2{dimer}.p2	NM_007686|Cfi|12630|complement component factor i	U47810|Cfi|12630|complement component factor i	BC150751|Cfi|12630|complement component factor i
mm9_v1_chr5_-_87997908_87998005	4.98393	POU5F1_SOX2{dimer}.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr18_-_43952520_43952536	4.90257	POU5F1_SOX2{dimer}.p2	BC147098|Gm94|225443|predicted gene 94	BC147099|Gm94|225443|predicted gene 94	BC171995|Gm94|225443|predicted gene 94	AK131908|Gm94|225443|predicted gene 94	AK131907|Gm94|225443|predicted gene 94	NM_001033280|Gm94|225443|predicted gene 94
mm9_v1_chr6_-_68967061_68967109	4.90145	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr8_-_48374755_48374779	4.89469	POU5F1_SOX2{dimer}.p2	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr11_-_99250663_99250679	4.73703	POU5F1_SOX2{dimer}.p2	AK014360|Krt10|16661|keratin 10	V00830|Krt10|16661|keratin 10	AK076508|Krt10|16661|keratin 10	AK081914|Krt10|16661|keratin 10	AK081402|Krt10|16661|keratin 10	NM_010660|Krt10|16661|keratin 10
mm9_v1_chr5_-_75098910_75098927	4.73508	POU5F1_SOX2{dimer}.p2	AF034745|Lnx1|16924|ligand of numb-protein X 1	NM_001159577|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr4_+_126754614_126754751	4.68961	POU5F1_SOX2{dimer}.p2	AK035136|Zmym6|100177|zinc finger, MYM-type 6	NM_177462|Zmym6|100177|zinc finger, MYM-type 6	AK081836|Zmym6|100177|zinc finger, MYM-type 6	BC094598|Zmym6|100177|zinc finger, MYM-type 6	AK170695|Zmym6|100177|zinc finger, MYM-type 6	AK082594|Zmym6|100177|zinc finger, MYM-type 6	BC140958|Zmym6|100177|zinc finger, MYM-type 6	BC144807|Zmym6|100177|zinc finger, MYM-type 6
mm9_v1_chr1_+_45368443_45368526	4.65293	POU5F1_SOX2{dimer}.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr3_-_157694667_157694727	4.61037	POU5F1_SOX2{dimer}.p2	BC069945|Srsf11|69207|serine/arginine-rich splicing factor 11	BC021809|Srsf11|69207|serine/arginine-rich splicing factor 11	AK029394|Srsf11|69207|serine/arginine-rich splicing factor 11	BC002111|Srsf11|69207|serine/arginine-rich splicing factor 11	AK146719|Srsf11|69207|serine/arginine-rich splicing factor 11	AK002411|Srsf11|69207|serine/arginine-rich splicing factor 11	NM_001093753|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr7_+_22617369_22617369	4.57487	POU5F1_SOX2{dimer}.p2	NM_001166747|Vmn1r135|667404|vomeronasal 1 receptor 135	NM_001166755|Vmn1r163|667586|vomeronasal 1 receptor 163
mm9_v1_chr1_-_170361525_170361683	4.52317	POU5F1_SOX2{dimer}.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr16_+_43321404_43321450	4.47741	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr13_-_96295153_96295194	4.41856	POU5F1_SOX2{dimer}.p2	AX785009|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	Z48043|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	BC025432|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK144986|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK158462|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK160916|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	NM_007974|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1
mm9_v1_chr2_-_26359261_26359353	4.31662	POU5F1_SOX2{dimer}.p2	AK090118|Notch1|18128|Notch gene homolog 1 (Drosophila)	NM_008714|Notch1|18128|Notch gene homolog 1 (Drosophila)
mm9_v1_chr9_+_46036799_46036808	4.22774	POU5F1_SOX2{dimer}.p2	L04151|Apoa1|11806|apolipoprotein A-I	BC091745|Apoa1|11806|apolipoprotein A-I	BC019837|Apoa1|11806|apolipoprotein A-I	BC012253|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr1_+_51346086_51346100	4.18129	POU5F1_SOX2{dimer}.p2	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr7_+_22134391_22134391	4.07512	POU5F1_SOX2{dimer}.p2	NM_001166739|Vmn1r128|667199|vomeronasal 1 receptor 128
mm9_v1_chr12_-_100688283_100688306	3.95115	POU5F1_SOX2{dimer}.p2	NM_183186|Foxn3|71375|forkhead box N3	AK148970|Foxn3|71375|forkhead box N3
mm9_v1_chr14_-_44185677_44185677	3.92539	POU5F1_SOX2{dimer}.p2	BC049548|Gm10377|100042055|predicted gene 10377	BC089536|Gm10375|100042342|predicted gene 10375	NM_001098269|Gm10375|100042342|predicted gene 10375
mm9_v1_chr19_-_36811090_36811095	3.84198	POU5F1_SOX2{dimer}.p2	BC054739|Ppp1r3c|53412|protein phosphatase 1, regulatory (inhibitor) subunit 3C	NM_016854|Ppp1r3c|53412|protein phosphatase 1, regulatory (inhibitor) subunit 3C
mm9_v1_chr3_+_93136665_93136689	3.83239	POU5F1_SOX2{dimer}.p2	AK004070|Hrnr|68723|hornerin
mm9_v1_chr13_+_97837240_97837241	3.82724	POU5F1_SOX2{dimer}.p2	BC084589|Fam169a|320557|family with sequence similarity 169, member A	NM_001146045|Fam169a|320557|family with sequence similarity 169, member A
mm9_v1_chr5_-_87998014_87998030	3.81443	POU5F1_SOX2{dimer}.p2	AK160466|Sult1d1|53315|sulfotransferase family 1D, member 1	NM_016771|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr1_-_141982814_141983012	3.69316	POU5F1_SOX2{dimer}.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chr3_-_113094211_113094366	3.66148	POU5F1_SOX2{dimer}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr10_+_97028409_97028443	3.56431	POU5F1_SOX2{dimer}.p2	AK075737|Lum|17022|lumican	AK085240|Lum|17022|lumican	AK164774|Lum|17022|lumican
mm9_v1_chr6_+_34659440_34659540	3.55333	POU5F1_SOX2{dimer}.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr5_+_35341726_35341726	3.55014	POU5F1_SOX2{dimer}.p2	AK014569|Rgs12|71729|regulator of G-protein signaling 12	AK161129|Rgs12|71729|regulator of G-protein signaling 12	NM_001163512|Rgs12|71729|regulator of G-protein signaling 12
mm9_v1_chr7_-_138465593_138465805	3.51597	POU5F1_SOX2{dimer}.p2	BC140992|Cuzd1|16433|CUB and zona pellucida-like domains 1	NM_008411|Cuzd1|16433|CUB and zona pellucida-like domains 1	U69699|Cuzd1|16433|CUB and zona pellucida-like domains 1
mm9_v1_chr8_-_63433528_63433596	3.48871	POU5F1_SOX2{dimer}.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr14_-_44026325_44026343	3.46292	POU5F1_SOX2{dimer}.p2	BC061060|1700001F09Rik|71826|RIKEN cDNA 1700001F09 gene	AK005587|1700001F09Rik|71826|RIKEN cDNA 1700001F09 gene	NM_027940|1700001F09Rik|71826|RIKEN cDNA 1700001F09 gene
mm9_v1_chr12_+_72149332_72149349	3.44237	POU5F1_SOX2{dimer}.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr16_+_36885096_36885119	3.38005	POU5F1_SOX2{dimer}.p2	NM_030035|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC145221|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC150731|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr8_+_112514380_112514381	3.29623	POU5F1_SOX2{dimer}.p2	BC037526|Tat|234724|tyrosine aminotransferase
mm9_v1_chr11_+_101191918_101191919	3.29252	POU5F1_SOX2{dimer}.p2	AF054831|Aoc3|11754|amine oxidase, copper containing 3	NM_009675|Aoc3|11754|amine oxidase, copper containing 3
mm9_v1_chr11_+_100406921_100407015	3.25945	POU5F1_SOX2{dimer}.p2	BC050805|Ttc25|74407|tetratricopeptide repeat domain 25	NM_028918|Ttc25|74407|tetratricopeptide repeat domain 25	AK161541|Ttc25|74407|tetratricopeptide repeat domain 25	AK162855|Ttc25|74407|tetratricopeptide repeat domain 25	AK016657|Ttc25|74407|tetratricopeptide repeat domain 25
mm9_v1_chr11_-_90252208_90252214	3.22228	POU5F1_SOX2{dimer}.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr8_+_55635683_55635717	3.1795	POU5F1_SOX2{dimer}.p2	AK003770|Asb5|76294|ankyrin repeat and SOCs box-containing 5	NM_029569|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC120851|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC132007|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr7_-_23350361_23350361	3.09155	POU5F1_SOX2{dimer}.p2	NM_001167162|Gm4201|100043061|predicted gene 4201	NM_001167163|Gm4141|100042976|predicted gene 4141
mm9_v1_chr18_-_20160536_20160597	3.0838	POU5F1_SOX2{dimer}.p2	BC144845|Dsc3|13507|desmocollin 3	NM_007882|Dsc3|13507|desmocollin 3	Y11169|Dsc3|13507|desmocollin 3
mm9_v1_chr7_-_21161589_21161589	3.02884	POU5F1_SOX2{dimer}.p2	NM_001167162|Gm4201|100043061|predicted gene 4201	NM_001167163|Gm4141|100042976|predicted gene 4141
mm9_v1_chr6_+_54222814_54222856	3.01022	POU5F1_SOX2{dimer}.p2	BC051139|Chn2|69993|chimerin (chimaerin) 2	NM_023543|Chn2|69993|chimerin (chimaerin) 2	BC141060|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr8_+_12949417_12949485	2.97339	POU5F1_SOX2{dimer}.p2	NM_001159485|Mcf2l|17207|mcf.2 transforming sequence-like	NM_001159486|Mcf2l|17207|mcf.2 transforming sequence-like	AK170186|Mcf2l|17207|mcf.2 transforming sequence-like	AK170558|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr14_+_76904316_76904371	2.9525	POU5F1_SOX2{dimer}.p2	AK147039|Tsc22d1|21807|TSC22 domain family, member 1	NM_009366|Tsc22d1|21807|TSC22 domain family, member 1	AK145204|Tsc22d1|21807|TSC22 domain family, member 1	AK135277|Tsc22d1|21807|TSC22 domain family, member 1	AK135282|Tsc22d1|21807|TSC22 domain family, member 1	AK135514|Tsc22d1|21807|TSC22 domain family, member 1	AK148732|Tsc22d1|21807|TSC22 domain family, member 1	X62940|Tsc22d1|21807|TSC22 domain family, member 1	AK179000|Tsc22d1|21807|TSC22 domain family, member 1	BC026703|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr1_-_142079842_142079987	2.91354	POU5F1_SOX2{dimer}.p2	M31979|Cfh|12628|complement component factor h	BC066092|Cfh|12628|complement component factor h	AK087707|Cfh|12628|complement component factor h	M12660|Cfh|12628|complement component factor h	AK052688|Cfh|12628|complement component factor h	NM_009888|Cfh|12628|complement component factor h
mm9_v1_chr8_+_55635768_55635781	2.90265	POU5F1_SOX2{dimer}.p2	BC108405|Asb5|76294|ankyrin repeat and SOCs box-containing 5	AF398966|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr4_-_137869546_137869914	2.8677	POU5F1_SOX2{dimer}.p2	AK219773|Pink1|68943|PTEN induced putative kinase 1	AK196813|Pink1|68943|PTEN induced putative kinase 1	AK190338|Pink1|68943|PTEN induced putative kinase 1	AK190010|Pink1|68943|PTEN induced putative kinase 1	AK219694|Pink1|68943|PTEN induced putative kinase 1	AK213324|Pink1|68943|PTEN induced putative kinase 1	AK218284|Pink1|68943|PTEN induced putative kinase 1	AK205601|Pink1|68943|PTEN induced putative kinase 1	AK182588|Pink1|68943|PTEN induced putative kinase 1	AK219274|Pink1|68943|PTEN induced putative kinase 1	AK179666|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chr2_+_20644000_20644006	2.78452	POU5F1_SOX2{dimer}.p2	AK054453|Etl4|208618|enhancer trap locus 4	AK086078|Etl4|208618|enhancer trap locus 4
mm9_v1_chr10_+_53057491_53057558	2.76089	POU5F1_SOX2{dimer}.p2	NM_001141927|Pln|18821|phospholamban	NM_023129|Pln|18821|phospholamban	BC061097|Pln|18821|phospholamban	AK002622|Pln|18821|phospholamban	AK040718|Pln|18821|phospholamban	S46792|Pln|18821|phospholamban	AK142708|Pln|18821|phospholamban	AK052199|Pln|18821|phospholamban
mm9_v1_chr18_+_34480612_34480673	2.75576	POU5F1_SOX2{dimer}.p2	AK137301|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr14_+_4126976_4126976	2.74388	POU5F1_SOX2{dimer}.p2	BC093494|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790	NM_001029930|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790
mm9_v1_chr3_+_97432773_97432782	2.7323	POU5F1_SOX2{dimer}.p2	AK133675|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr8_+_22887026_22887070	2.72664	POU5F1_SOX2{dimer}.p2	NM_007843|Defb1|13214|defensin beta 1	AK142544|Defb1|13214|defensin beta 1	BC024380|Defb1|13214|defensin beta 1
mm9_v1_chr11_+_42963378_42963378	2.67414	POU5F1_SOX2{dimer}.p2	AK033531|Atp10b|319767|ATPase, class V, type 10B	NM_176999|Atp10b|319767|ATPase, class V, type 10B
mm9_v1_chr8_+_112514400_112514407	2.66644	POU5F1_SOX2{dimer}.p2	BC025934|Tat|234724|tyrosine aminotransferase
mm9_v1_chr10_+_34018323_34018472	2.6348	POU5F1_SOX2{dimer}.p2	AK028517|Tspyl4|72480|TSPY-like 4
mm9_v1_chr9_-_50363242_50363242	2.58487	POU5F1_SOX2{dimer}.p2	NM_133217|Bco2|170752|beta-carotene oxygenase 2
mm9_v1_chr6_-_14705104_14705273	2.57983	POU5F1_SOX2{dimer}.p2	AK084719|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	BC109007|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	BC109008|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	AK084518|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	NM_080464|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A
mm9_v1_chr11_+_42234760_42234851	2.57358	POU5F1_SOX2{dimer}.p2	U14419|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	AK034069|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	GU086167|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr9_-_88987672_88987672	2.56269	POU5F1_SOX2{dimer}.p2	NM_001170884|Trim43b|666747|tripartite motif-containing 43B
mm9_v1_chr9_+_123676286_123676425	2.52568	POU5F1_SOX2{dimer}.p2	AK162996|Ccr9|12769|chemokine (C-C motif) receptor 9	AK050615|Ccr9|12769|chemokine (C-C motif) receptor 9	AK153975|Ccr9|12769|chemokine (C-C motif) receptor 9	NM_001166625|Ccr9|12769|chemokine (C-C motif) receptor 9	NM_009913|Ccr9|12769|chemokine (C-C motif) receptor 9	AK040129|Ccr9|12769|chemokine (C-C motif) receptor 9	AJ132336|Ccr9|12769|chemokine (C-C motif) receptor 9	AJ131357|Ccr9|12769|chemokine (C-C motif) receptor 9	AK038272|Ccr9|12769|chemokine (C-C motif) receptor 9
mm9_v1_chr9_+_14135884_14136028	2.50734	POU5F1_SOX2{dimer}.p2	AK033655|Sesn3|75747|sestrin 3
mm9_v1_chrX_+_131252542_131252558	2.49142	POU5F1_SOX2{dimer}.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chrX_+_131252456_131252527	2.49047	POU5F1_SOX2{dimer}.p2	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr5_-_121971589_121971703	2.46925	POU5F1_SOX2{dimer}.p2	AK132801|Adam1a|280668|a disintegrin and metallopeptidase domain 1a	AK132804|Adam1a|280668|a disintegrin and metallopeptidase domain 1a	AK133286|Adam1a|280668|a disintegrin and metallopeptidase domain 1a	AK133150|Adam1a|280668|a disintegrin and metallopeptidase domain 1a	BC052093|Adam1a|280668|a disintegrin and metallopeptidase domain 1a	NM_172126|Adam1a|280668|a disintegrin and metallopeptidase domain 1a
mm9_v1_chr9_+_88734001_88734001	2.46599	POU5F1_SOX2{dimer}.p2	NM_001177858|Trim43c|666731|tripartite motif-containing 43C
mm9_v1_chr12_-_114665550_114665585	2.46352	POU5F1_SOX2{dimer}.p2	AK134155|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr1_-_172236462_172236462	2.42959	POU5F1_SOX2{dimer}.p2	NM_001198955|Gm7694|665574|predicted gene 7694
mm9_v1_chr3_+_94736974_94736989	2.40595	POU5F1_SOX2{dimer}.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr14_+_5153653_5153668	2.39692	POU5F1_SOX2{dimer}.p2	NM_175393|4930555G01Rik|108978|RIKEN cDNA 4930555G01 gene	AK076920|4930555G01Rik|108978|RIKEN cDNA 4930555G01 gene
mm9_v1_chr3_+_137940628_137940681	2.36018	POU5F1_SOX2{dimer}.p2	BC054467|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr19_-_39723518_39723548	2.35476	POU5F1_SOX2{dimer}.p2	BC092260|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	BC106142|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	NM_001024719|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	AK149389|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67
mm9_v1_chr3_-_92568947_92568988	2.3474	POU5F1_SOX2{dimer}.p2	BC117062|Lce1h|67718|late cornified envelope 1H	BC119356|Lce1h|67718|late cornified envelope 1H	AK009424|Lce1h|67718|late cornified envelope 1H	AK010064|Lce1h|67718|late cornified envelope 1H	NM_026335|Lce1h|67718|late cornified envelope 1H
mm9_v1_chr1_+_45401659_45401671	2.32895	POU5F1_SOX2{dimer}.p2	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr11_+_105846442_105846551	2.31791	POU5F1_SOX2{dimer}.p2	BC052531|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr11_-_120900678_120900745	2.30932	POU5F1_SOX2{dimer}.p2	CT010368|Cd7|12516|CD7 antigen	BC024376|Cd7|12516|CD7 antigen	D10329|Cd7|12516|CD7 antigen	NM_009854|Cd7|12516|CD7 antigen	AK136444|Cd7|12516|CD7 antigen	AK154339|Cd7|12516|CD7 antigen
mm9_v1_chr3_-_113061599_113061616	2.29924	POU5F1_SOX2{dimer}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5
mm9_v1_chr11_-_109919796_109919831	2.29315	POU5F1_SOX2{dimer}.p2	AK148846|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a	BC026496|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr4_+_80480116_80480211	2.2782	POU5F1_SOX2{dimer}.p2	AK148332|Tyrp1|22178|tyrosinase-related protein 1	BC076598|Tyrp1|22178|tyrosinase-related protein 1	NM_031202|Tyrp1|22178|tyrosinase-related protein 1	X03687|Tyrp1|22178|tyrosinase-related protein 1	AK148370|Tyrp1|22178|tyrosinase-related protein 1	AK148441|Tyrp1|22178|tyrosinase-related protein 1
mm9_v1_chr13_-_35118959_35118964	2.27756	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr6_-_69367406_69367460	2.26946	POU5F1_SOX2{dimer}.p2	DQ372799|Igkv4-68|384515|immunoglobulin kappa variable 4-68
mm9_v1_chr6_+_141634834_141634916	2.2652	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr14_+_14286471_14286627	2.18843	POU5F1_SOX2{dimer}.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr8_+_112514335_112514362	2.17942	POU5F1_SOX2{dimer}.p2	NM_146214|Tat|234724|tyrosine aminotransferase	AK090244|Tat|234724|tyrosine aminotransferase	AK149383|Tat|234724|tyrosine aminotransferase	AK149526|Tat|234724|tyrosine aminotransferase	BC030728|Tat|234724|tyrosine aminotransferase	BC024120|Tat|234724|tyrosine aminotransferase	BC028821|Tat|234724|tyrosine aminotransferase	BC023949|Tat|234724|tyrosine aminotransferase	BC030729|Tat|234724|tyrosine aminotransferase
mm9_v1_chr6_-_129826635_129826689	2.17907	POU5F1_SOX2{dimer}.p2	BC132236|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AB033769|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AK080021|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	NM_133203|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17
mm9_v1_chr10_+_97028456_97028463	2.15328	POU5F1_SOX2{dimer}.p2	BC005550|Lum|17022|lumican	S79461|Lum|17022|lumican
mm9_v1_chr4_-_76240202_76240202	2.1343	POU5F1_SOX2{dimer}.p2	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr14_-_41998434_41998486	2.13148	POU5F1_SOX2{dimer}.p2	BC012896|Sftpd|20390|surfactant associated protein D	BC003705|Sftpd|20390|surfactant associated protein D	NM_009160|Sftpd|20390|surfactant associated protein D
mm9_v1_chr8_-_125421315_125421317	2.1203	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr10_+_69487700_69487703	2.11574	POU5F1_SOX2{dimer}.p2	AK033919|Ank3|11735|ankyrin 3, epithelial	AK036171|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr1_+_175603760_175603841	2.10212	POU5F1_SOX2{dimer}.p2	AK041099|Pydc3|100033459|pyrin domain containing 3	NM_001162938|Pydc3|100033459|pyrin domain containing 3
mm9_v1_chr5_-_87967164_87967219	2.08017	POU5F1_SOX2{dimer}.p2	U92076|Sult1b1|56362|sulfotransferase family 1B, member 1	AK033498|Sult1b1|56362|sulfotransferase family 1B, member 1	NM_019878|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr4_-_129291500_129291511	2.07446	POU5F1_SOX2{dimer}.p2	NM_001195730|Dcdc2b|667452|doublecortin domain containing 2b	AK086820|Dcdc2b|667452|doublecortin domain containing 2b
mm9_v1_chr17_+_55889248_55889329	2.06911	POU5F1_SOX2{dimer}.p2	AK036459|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	NM_139138|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	AF396935|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	BC120538|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	BC120540|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	AK155935|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	AK037483|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4	AY032690|Emr4|52614|EGF-like module containing, mucin-like, hormone receptor-like sequence 4
mm9_v1_chr13_+_93614714_93614741	2.04977	POU5F1_SOX2{dimer}.p2	AK090249|Mtx3|382793|metaxin 3	NM_001162945|Mtx3|382793|metaxin 3
mm9_v1_chr5_+_129106980_129107017	2.0001	POU5F1_SOX2{dimer}.p2	AY509002|Fzd10|93897|frizzled homolog 10 (Drosophila)	NM_175284|Fzd10|93897|frizzled homolog 10 (Drosophila)	BC117759|Fzd10|93897|frizzled homolog 10 (Drosophila)
mm9_v1_chr8_+_56040553_56040581	1.99581	POU5F1_SOX2{dimer}.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr5_-_140290195_140290236	1.98155	POU5F1_SOX2{dimer}.p2	BC026659|Tmem184a|231832|transmembrane protein 184a	AK050489|Tmem184a|231832|transmembrane protein 184a	NM_001161548|Tmem184a|231832|transmembrane protein 184a
mm9_v1_chr1_+_45368382_45368399	1.976	POU5F1_SOX2{dimer}.p2	NM_009930|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr8_-_8666771_8666782	1.97204	POU5F1_SOX2{dimer}.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr14_-_56563474_56563574	1.96934	POU5F1_SOX2{dimer}.p2	BC139454|Cma1|17228|chymase 1, mast cell	BC139457|Cma1|17228|chymase 1, mast cell	NM_010780|Cma1|17228|chymase 1, mast cell	X68805|Cma1|17228|chymase 1, mast cell	M73760|Cma1|17228|chymase 1, mast cell
mm9_v1_chr18_-_35881144_35881144	1.95204	POU5F1_SOX2{dimer}.p2	AK157485|Ecscr|68545|endothelial cell-specific chemotaxis regulator	NM_001033141|Ecscr|68545|endothelial cell-specific chemotaxis regulator
mm9_v1_chr18_+_37663917_37664076	1.93959	POU5F1_SOX2{dimer}.p2	AK045399|Pcdhb20|93891|protocadherin beta 20	NM_053145|Pcdhb20|93891|protocadherin beta 20	AK046137|Pcdhb20|93891|protocadherin beta 20	AF326313|Pcdhb20|93891|protocadherin beta 20	AK045527|Pcdhb20|93891|protocadherin beta 20	BC031895|Pcdhb20|93891|protocadherin beta 20	AY013782|Pcdhb20|93891|protocadherin beta 20
mm9_v1_chr14_-_69200119_69200151	1.93317	POU5F1_SOX2{dimer}.p2	BC046324|Adamdec1|58860|ADAM-like, decysin 1	AJ242912|Adamdec1|58860|ADAM-like, decysin 1	NM_021475|Adamdec1|58860|ADAM-like, decysin 1	AK156586|Adamdec1|58860|ADAM-like, decysin 1	BC026542|Adamdec1|58860|ADAM-like, decysin 1
mm9_v1_chr17_+_8428907_8428907	1.87374	POU5F1_SOX2{dimer}.p2	NM_001190333|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr1_+_51345952_51345993	1.85006	POU5F1_SOX2{dimer}.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr3_+_95354031_95354039	1.84597	POU5F1_SOX2{dimer}.p2	AJ223208|Ctss|13040|cathepsin S
mm9_v1_chr10_+_69388242_69388279	1.83839	POU5F1_SOX2{dimer}.p2	L40631|Ank3|11735|ankyrin 3, epithelial	NM_009670|Ank3|11735|ankyrin 3, epithelial	NM_170687|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr12_-_4344470_4344503	1.83553	POU5F1_SOX2{dimer}.p2	U64606|Ncoa1|17977|nuclear receptor coactivator 1	BC068177|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr11_-_90252228_90252237	1.81404	POU5F1_SOX2{dimer}.p2	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr1_-_132586370_132586494	1.80091	POU5F1_SOX2{dimer}.p2	BC065379|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr11_+_31900378_31900504	1.80071	POU5F1_SOX2{dimer}.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr9_-_114549148_114549229	1.78567	POU5F1_SOX2{dimer}.p2	AK149944|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK167288|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC025554|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK029103|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	NM_153585|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK080503|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK157824|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr5_-_51945054_51945159	1.78171	POU5F1_SOX2{dimer}.p2	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr3_-_112959644_112959644	1.77546	POU5F1_SOX2{dimer}.p2	NM_001190403|Amy2b|545562|amylase 2b	NM_001190404|Amy2b|545562|amylase 2b
mm9_v1_chr3_+_88769733_88769733	1.75805	POU5F1_SOX2{dimer}.p2	NM_138679|Ash1l|192195|ash1 (absent, small, or homeotic)-like (Drosophila)
mm9_v1_chr19_-_44471675_44471892	1.75767	POU5F1_SOX2{dimer}.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr15_-_79359998_79360114	1.73528	POU5F1_SOX2{dimer}.p2	AK079294|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK011338|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK079442|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK164451|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr1_+_51346108_51346149	1.71782	POU5F1_SOX2{dimer}.p2	S67386|Sdpr|20324|serum deprivation response	BC020008|Sdpr|20324|serum deprivation response
mm9_v1_chr3_-_113126814_113126969	1.70573	POU5F1_SOX2{dimer}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chrX_+_160811458_160811498	1.68732	POU5F1_SOX2{dimer}.p2	NM_010216|Figf|14205|c-fos induced growth factor	X99572|Figf|14205|c-fos induced growth factor	BC080770|Figf|14205|c-fos induced growth factor
mm9_v1_chr3_-_91887051_91887065	1.6748	POU5F1_SOX2{dimer}.p2	BC058223|Lor|16939|loricrin	BC026781|Lor|16939|loricrin	M34398|Lor|16939|loricrin	NM_008508|Lor|16939|loricrin
mm9_v1_chr3_+_97432797_97432807	1.67438	POU5F1_SOX2{dimer}.p2	BC022991|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr11_+_89892027_89892040	1.66798	POU5F1_SOX2{dimer}.p2	AK003574|Tmem100|67888|transmembrane protein 100	AK033406|Tmem100|67888|transmembrane protein 100
mm9_v1_chr1_+_133558517_133558572	1.66653	POU5F1_SOX2{dimer}.p2	X97399|Ctse|13034|cathepsin E	AK165271|Ctse|13034|cathepsin E	CT010252|Ctse|13034|cathepsin E
mm9_v1_chr19_-_29095519_29095616	1.66124	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr13_+_113657736_113657889	1.66113	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr19_-_20802015_20802054	1.646	POU5F1_SOX2{dimer}.p2	BC046315|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC032880|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139412|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139413|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	NM_011921|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	U96401|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7
mm9_v1_chr2_-_76820599_76820607	1.64556	POU5F1_SOX2{dimer}.p2	AK084718|Ttn|22138|titin	AK052859|Ttn|22138|titin	AK084709|Ttn|22138|titin	AK085811|Ttn|22138|titin	AK085832|Ttn|22138|titin	NM_011652|Ttn|22138|titin	NM_028004|Ttn|22138|titin
mm9_v1_chr17_-_35164860_35164960	1.64294	POU5F1_SOX2{dimer}.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr3_+_51465095_51465114	1.63763	POU5F1_SOX2{dimer}.p2	NM_174995|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr9_+_44884261_44884391	1.6005	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr3_-_98566258_98566332	1.55806	POU5F1_SOX2{dimer}.p2	M77015|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	AK149452|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	BC089581|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001012306|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001161744|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001161745|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3
mm9_v1_chr6_-_89795530_89795608	1.55721	POU5F1_SOX2{dimer}.p2	NM_053221|Vmn1r42|113848|vomeronasal 1 receptor 42	BC125372|Vmn1r42|113848|vomeronasal 1 receptor 42
mm9_v1_chr10_+_115580947_115580958	1.55447	POU5F1_SOX2{dimer}.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr6_-_126485370_126485572	1.53993	POU5F1_SOX2{dimer}.p2	BC021787|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	AK146843|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	AF108659|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	L22218|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	NM_145983|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5
mm9_v1_chr14_+_61351770_61351875	1.53724	POU5F1_SOX2{dimer}.p2	AK151394|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr13_+_23673433_23673471	1.50357	POU5F1_SOX2{dimer}.p2	NM_175654|Hist1h4d|319156|histone cluster 1, H4d	BC119611|Hist1h4d|319156|histone cluster 1, H4d
mm9_v1_chr3_+_51465127_51465166	1.46455	POU5F1_SOX2{dimer}.p2	BC132234|Mgst2|211666|microsomal glutathione S-transferase 2	BC132260|Mgst2|211666|microsomal glutathione S-transferase 2	BC145529|Mgst2|211666|microsomal glutathione S-transferase 2	BC028535|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr5_+_22988226_22988243	1.45571	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr7_-_21883531_21883531	1.45521	POU5F1_SOX2{dimer}.p2	NM_001166741|Vmn1r121|667240|vomeronasal 1 receptor 121
mm9_v1_chr8_+_56040445_56040534	1.44705	POU5F1_SOX2{dimer}.p2	BC029683|Gpm6a|234267|glycoprotein m6a	BC033357|Gpm6a|234267|glycoprotein m6a	AK053538|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_-_46380114_46380132	1.43968	POU5F1_SOX2{dimer}.p2	BC026555|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr3_+_103811134_103811169	1.43366	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr1_+_52065469_52065543	1.42883	POU5F1_SOX2{dimer}.p2	AK037598|Stat4|20849|signal transducer and activator of transcription 4	AK157083|Stat4|20849|signal transducer and activator of transcription 4	U06923|Stat4|20849|signal transducer and activator of transcription 4	BC052907|Stat4|20849|signal transducer and activator of transcription 4	BC098499|Stat4|20849|signal transducer and activator of transcription 4
mm9_v1_chr4_+_147822690_147822721	1.41476	POU5F1_SOX2{dimer}.p2	NM_020009|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AK172584|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AF152838|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AK036004|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)
mm9_v1_chr2_+_154959216_154959300	1.41224	POU5F1_SOX2{dimer}.p2	NM_008395|Itch|16396|itchy, E3 ubiquitin protein ligase	AK082003|Itch|16396|itchy, E3 ubiquitin protein ligase	AK163006|Itch|16396|itchy, E3 ubiquitin protein ligase	AK141800|Itch|16396|itchy, E3 ubiquitin protein ligase	AK037940|Itch|16396|itchy, E3 ubiquitin protein ligase	BC062934|Itch|16396|itchy, E3 ubiquitin protein ligase	AK020167|Itch|16396|itchy, E3 ubiquitin protein ligase	AK220164|Itch|16396|itchy, E3 ubiquitin protein ligase	AK048303|Itch|16396|itchy, E3 ubiquitin protein ligase	BC064678|Itch|16396|itchy, E3 ubiquitin protein ligase	AF037454|Itch|16396|itchy, E3 ubiquitin protein ligase
mm9_v1_chr17_+_34766489_34766633	1.40758	POU5F1_SOX2{dimer}.p2	BC128489|Prrt1|260297|proline-rich transmembrane protein 1	NM_030890|Prrt1|260297|proline-rich transmembrane protein 1	BC115512|Prrt1|260297|proline-rich transmembrane protein 1	BC115513|Prrt1|260297|proline-rich transmembrane protein 1
mm9_v1_chrX_+_160876032_160876036	1.39667	POU5F1_SOX2{dimer}.p2	AK004396|Asb11|68854|ankyrin repeat and SOCS box-containing 11	NM_026853|Asb11|68854|ankyrin repeat and SOCS box-containing 11	BC064047|Asb11|68854|ankyrin repeat and SOCS box-containing 11
mm9_v1_chr1_-_82232392_82232507	1.39517	POU5F1_SOX2{dimer}.p2	AK141842|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr3_+_68376319_68376428	1.39028	POU5F1_SOX2{dimer}.p2	BC060529|Schip1|30953|schwannomin interacting protein 1	AK021361|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr15_+_6395311_6395349	1.38523	POU5F1_SOX2{dimer}.p2	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr3_+_94736993_94737043	1.38024	POU5F1_SOX2{dimer}.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chrX_+_54662330_54662330	1.37991	POU5F1_SOX2{dimer}.p2	NM_001128625|Gm364|245423|predicted gene 364
mm9_v1_chr9_-_86581204_86581205	1.3711	POU5F1_SOX2{dimer}.p2	AK163278|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK163403|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_001198933|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chr7_-_148008029_148008088	1.35598	POU5F1_SOX2{dimer}.p2	BC068250|Zfp941|407812|zinc finger protein 941	BC066028|Zfp941|407812|zinc finger protein 941	AK045889|Zfp941|407812|zinc finger protein 941	AK141045|Zfp941|407812|zinc finger protein 941	NM_001001180|Zfp941|407812|zinc finger protein 941
mm9_v1_chr9_+_86636433_86636473	1.35087	POU5F1_SOX2{dimer}.p2	NM_178738|Prss35|244954|protease, serine, 35	AK030671|Prss35|244954|protease, serine, 35	AK031411|Prss35|244954|protease, serine, 35	AK031644|Prss35|244954|protease, serine, 35	AK076281|Prss35|244954|protease, serine, 35	BC075675|Prss35|244954|protease, serine, 35	DQ223037|Prss35|244954|protease, serine, 35
mm9_v1_chr7_-_22086485_22086485	1.34604	POU5F1_SOX2{dimer}.p2	NM_001166838|Vmn1r126|100043013|vomeronasal 1 receptor 126	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr1_-_172018982_172019074	1.34383	POU5F1_SOX2{dimer}.p2	AK196844|Ddr2|18214|discoidin domain receptor family, member 2	NM_022563|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr6_-_130183339_130183339	1.32933	POU5F1_SOX2{dimer}.p2	NM_001110323|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10093|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10095|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr3_-_81779636_81779675	1.31843	POU5F1_SOX2{dimer}.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr8_+_23348971_23348971	1.28981	POU5F1_SOX2{dimer}.p2	AB039946|Thsd1|56229|thrombospondin, type I, domain 1	BC119603|Thsd1|56229|thrombospondin, type I, domain 1	NM_019576|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr12_+_110884340_110884400	1.28578	POU5F1_SOX2{dimer}.p2	AF498294|Rian|75745|RNA imprinted and accumulated in nucleus	AB063319|Rian|75745|RNA imprinted and accumulated in nucleus	AK017440|Rian|75745|RNA imprinted and accumulated in nucleus
mm9_v1_chr3_+_133902563_133902608	1.28451	POU5F1_SOX2{dimer}.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr7_-_23249092_23249093	1.27235	POU5F1_SOX2{dimer}.p2	BC107204|Gm10670|100042971|predicted gene 10670	NM_001167160|Gm10665|100043058|predicted gene 10665	NM_001167161|Gm10670|100042971|predicted gene 10670
mm9_v1_chr2_-_164025823_164025852	1.26964	POU5F1_SOX2{dimer}.p2	AK018909|Wfdc15a|68221|WAP four-disulfide core domain 15A	BC100423|Wfdc15a|68221|WAP four-disulfide core domain 15A	AK006775|Wfdc15a|68221|WAP four-disulfide core domain 15A	AK018854|Wfdc15a|68221|WAP four-disulfide core domain 15A	AK018888|Wfdc15a|68221|WAP four-disulfide core domain 15A	NM_183271|Wfdc15a|68221|WAP four-disulfide core domain 15A
mm9_v1_chr13_+_58909236_58909250	1.25845	POU5F1_SOX2{dimer}.p2	AK028827|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr8_+_34681015_34681015	1.23635	POU5F1_SOX2{dimer}.p2	AF285589|Tex15|104271|testis expressed gene 15	NM_031374|Tex15|104271|testis expressed gene 15
mm9_v1_chr8_-_46380165_46380188	1.23599	POU5F1_SOX2{dimer}.p2	NM_008455|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr7_-_48755259_48755259	1.22633	POU5F1_SOX2{dimer}.p2	AK164198|AW146154|101835|expressed sequence AW146154	NM_001033530|AW146154|101835|expressed sequence AW146154
mm9_v1_chr7_-_88974235_88974382	1.21716	POU5F1_SOX2{dimer}.p2	BC072618|Btbd1|83962|BTB (POZ) domain containing 1	NM_146193|Btbd1|83962|BTB (POZ) domain containing 1	BC087937|Btbd1|83962|BTB (POZ) domain containing 1	AK088345|Btbd1|83962|BTB (POZ) domain containing 1
mm9_v1_chr7_-_23769691_23769691	1.21131	POU5F1_SOX2{dimer}.p2	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr7_-_22546493_22546493	1.21131	POU5F1_SOX2{dimer}.p2	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr4_+_155387803_155387982	1.209	POU5F1_SOX2{dimer}.p2	NM_011659|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139239|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139266|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC065782|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	Z21674|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4
mm9_v1_chr5_-_148118681_148118824	1.20666	POU5F1_SOX2{dimer}.p2	AK049574|Cdx2|12591|caudal type homeobox 2	BC103516|Cdx2|12591|caudal type homeobox 2	BC103517|Cdx2|12591|caudal type homeobox 2	BC103519|Cdx2|12591|caudal type homeobox 2	BC103520|Cdx2|12591|caudal type homeobox 2	AK049566|Cdx2|12591|caudal type homeobox 2	NM_007673|Cdx2|12591|caudal type homeobox 2
mm9_v1_chr14_-_8164908_8164908	1.19524	POU5F1_SOX2{dimer}.p2	BC090991|Gm5797|545013|predicted gene 5797	NM_001025085|Gm5797|545013|predicted gene 5797
mm9_v1_chr2_+_148624569_148624638	1.18508	POU5F1_SOX2{dimer}.p2	BC049753|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)	AK018943|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)	NM_009978|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)	AK161808|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)	AF090691|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)	AK054409|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)	S49926|Cst8|13012|cystatin 8 (cystatin-related epididymal spermatogenic)
mm9_v1_chr1_-_72258684_72258880	1.18294	POU5F1_SOX2{dimer}.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr3_-_98618351_98618365	1.17858	POU5F1_SOX2{dimer}.p2	BC053501|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6	AY046512|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6	AK142267|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6	NM_013821|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6
mm9_v1_chr7_+_97535516_97535523	1.1571	POU5F1_SOX2{dimer}.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr7_-_30836383_30836414	1.1568	POU5F1_SOX2{dimer}.p2	AK030632|Zfp14|243906|zinc finger protein 14	AK045631|Zfp14|243906|zinc finger protein 14	AK028663|Zfp14|243906|zinc finger protein 14	BC066057|Zfp14|243906|zinc finger protein 14	AK032214|Zfp14|243906|zinc finger protein 14	NM_011748|Zfp14|243906|zinc finger protein 14	NM_178733|Zfp14|243906|zinc finger protein 14
mm9_v1_chr3_+_94497485_94497530	1.15209	POU5F1_SOX2{dimer}.p2	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr1_-_65128840_65128863	1.14936	POU5F1_SOX2{dimer}.p2	BC056455|Crygb|12965|crystallin, gamma B	NM_144761|Crygb|12965|crystallin, gamma B	EF426303|Crygb|12965|crystallin, gamma B	AK143110|Crygb|12965|crystallin, gamma B
mm9_v1_chr7_+_28914482_28914484	1.14532	POU5F1_SOX2{dimer}.p2	AK035473|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	AK035528|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	NM_001164655|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene
mm9_v1_chr11_-_103476052_103476052	1.13439	POU5F1_SOX2{dimer}.p2	AK029868|Gm884|380730|predicted gene 884	NM_001033434|Gm884|380730|predicted gene 884
mm9_v1_chr7_-_22919759_22919759	1.11617	POU5F1_SOX2{dimer}.p2	NM_001167573|Gm10666|100043037|predicted gene 10666	NM_207547|Vmn1r93|404290|vomernasal 1 receptor Vmn1r93
mm9_v1_chr6_+_58783693_58783693	1.11609	POU5F1_SOX2{dimer}.p2	BC042574|Herc3|73998|hect domain and RLD 3	BC145978|Herc3|73998|hect domain and RLD 3	BC145980|Herc3|73998|hect domain and RLD 3	NM_028705|Herc3|73998|hect domain and RLD 3
mm9_v1_chr7_-_21597204_21597204	1.11539	POU5F1_SOX2{dimer}.p2	NM_001166837|Vmn1r114|100042996|vomeronasal 1 receptor 114
mm9_v1_chrX_-_130516223_130516350	1.11169	POU5F1_SOX2{dimer}.p2	AK030401|Sytl4|27359|synaptotagmin-like 4	AK161582|Sytl4|27359|synaptotagmin-like 4	AB025258|Sytl4|27359|synaptotagmin-like 4	AB025259|Sytl4|27359|synaptotagmin-like 4	NM_013757|Sytl4|27359|synaptotagmin-like 4	BC026819|Sytl4|27359|synaptotagmin-like 4
mm9_v1_chr1_+_52065087_52065089	1.10896	POU5F1_SOX2{dimer}.p2	NM_011487|Stat4|20849|signal transducer and activator of transcription 4	U09351|Stat4|20849|signal transducer and activator of transcription 4
mm9_v1_chr16_-_45408997_45409165	1.10658	POU5F1_SOX2{dimer}.p2	AF004023|Cd200|17470|CD200 antigen	BC019172|Cd200|17470|CD200 antigen	AK009051|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	BC051984|Cd200|17470|CD200 antigen	AK164478|Cd200|17470|CD200 antigen	BC054759|Cd200|17470|CD200 antigen	AK131640|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	AK148308|Cd200|17470|CD200 antigen	NM_010818|Cd200|17470|CD200 antigen
mm9_v1_chr19_-_34952328_34952347	1.10487	POU5F1_SOX2{dimer}.p2	BC023496|Pank1|75735|pantothenate kinase 1
mm9_v1_chr13_+_4058817_4058874	1.09416	POU5F1_SOX2{dimer}.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chr14_-_56880985_56881096	1.09214	POU5F1_SOX2{dimer}.p2	CT010272|Gzmb|14939|granzyme B	M12302|Gzmb|14939|granzyme B	AK167770|Gzmb|14939|granzyme B	AK157856|Gzmb|14939|granzyme B	BC002085|Gzmb|14939|granzyme B	NM_013542|Gzmb|14939|granzyme B	X04072|Gzmb|14939|granzyme B
mm9_v1_chr4_-_151502979_151503033	1.08809	POU5F1_SOX2{dimer}.p2	BC057888|Espn|56226|espin	AK002284|Espn|56226|espin	BC044723|Espn|56226|espin	NM_019585|Espn|56226|espin
mm9_v1_chr7_-_20724436_20724436	1.08597	POU5F1_SOX2{dimer}.p2	NM_001167573|Gm10666|100043037|predicted gene 10666	NM_207547|Vmn1r93|404290|vomernasal 1 receptor Vmn1r93
mm9_v1_chr18_-_61371010_61371141	1.082	POU5F1_SOX2{dimer}.p2	AK007212|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	BC028345|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	D42049|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	AK163974|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2
mm9_v1_chrX_+_56164637_56164660	1.07807	POU5F1_SOX2{dimer}.p2	BC087920|4930550L24Rik|75352|RIKEN cDNA 4930550L24 gene	NM_023774|4930550L24Rik|75352|RIKEN cDNA 4930550L24 gene	AK016090|4930550L24Rik|75352|RIKEN cDNA 4930550L24 gene
mm9_v1_chr2_-_73498303_73498483	1.07419	POU5F1_SOX2{dimer}.p2	AB264771|Chn1|108699|chimerin (chimaerin) 1	BC025023|Chn1|108699|chimerin (chimaerin) 1	AK049943|Chn1|108699|chimerin (chimaerin) 1	AK147686|Chn1|108699|chimerin (chimaerin) 1	BC010825|Chn1|108699|chimerin (chimaerin) 1	BC024796|Chn1|108699|chimerin (chimaerin) 1	AK032630|Chn1|108699|chimerin (chimaerin) 1	AK075606|Chn1|108699|chimerin (chimaerin) 1	NM_001166604|Chn1|108699|chimerin (chimaerin) 1	NM_175752|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr3_+_101949321_101949348	1.0673	POU5F1_SOX2{dimer}.p2	AK132122|Casq2|12373|calsequestrin 2
mm9_v1_chr8_+_46744023_46744252	1.05942	POU5F1_SOX2{dimer}.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr7_+_26682681_26682715	1.05297	POU5F1_SOX2{dimer}.p2	BC060973|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	NM_009999|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	AF128849|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	M21856|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	X99715|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chr12_+_105644917_105644968	1.0466	POU5F1_SOX2{dimer}.p2	NM_009252|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N	BC013651|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N	M64086|Serpina3n|20716|serine (or cysteine) peptidase inhibitor, clade A, member 3N
mm9_v1_chr13_+_78164162_78164172	1.04478	POU5F1_SOX2{dimer}.p2	AK005948|Pou5f2|75507|POU domain class 5, transcription factor 2	NM_029315|Pou5f2|75507|POU domain class 5, transcription factor 2	AK076753|Pou5f2|75507|POU domain class 5, transcription factor 2
mm9_v1_chr7_+_127986324_127986492	1.04374	POU5F1_SOX2{dimer}.p2	AK028524|Eef2k|13631|eukaryotic elongation factor-2 kinase	BC003433|Eef2k|13631|eukaryotic elongation factor-2 kinase	NM_007908|Eef2k|13631|eukaryotic elongation factor-2 kinase
mm9_v1_chr11_+_48639639_48639641	1.03966	POU5F1_SOX2{dimer}.p2	NM_053166|Trim7|94089|tripartite motif-containing 7	AF396656|Trim7|94089|tripartite motif-containing 7
mm9_v1_chr16_-_36784864_36785047	1.03628	POU5F1_SOX2{dimer}.p2	BC018335|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK128939|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK018393|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138627|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138628|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC051199|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AF111811|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_001145899|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_021301|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2
mm9_v1_chr9_-_121825422_121825428	1.03242	POU5F1_SOX2{dimer}.p2	NM_010012|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr6_+_88674697_88674748	1.01201	POU5F1_SOX2{dimer}.p2	NM_001166250|Mgll|23945|monoglyceride lipase	NM_001166251|Mgll|23945|monoglyceride lipase	AK006949|Mgll|23945|monoglyceride lipase
mm9_v1_chr1_+_166081951_166082088	1.00947	POU5F1_SOX2{dimer}.p2	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr5_-_31495395_31495419	0.995964	POU5F1_SOX2{dimer}.p2	BC021884|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	AK154364|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	AK158282|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta
mm9_v1_chr7_+_137836057_137836069	0.99571	POU5F1_SOX2{dimer}.p2	AB041546|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_021314|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr17_-_65989095_65989095	0.987683	POU5F1_SOX2{dimer}.p2	AF196282|Txndc2|213272|thioredoxin domain containing 2 (spermatozoa)	NM_153519|Txndc2|213272|thioredoxin domain containing 2 (spermatozoa)
mm9_v1_chr5_-_110715166_110715186	0.987014	POU5F1_SOX2{dimer}.p2	NM_008993|Pxmp2|19301|peroxisomal membrane protein 2
mm9_v1_chr9_-_21571635_21571709	0.983327	POU5F1_SOX2{dimer}.p2	AK189211|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr7_-_67285104_67285104	0.982474	POU5F1_SOX2{dimer}.p2	NM_001082962|Snrpn|20646|small nuclear ribonucleoprotein N
mm9_v1_chr4_-_138419379_138419383	0.978819	POU5F1_SOX2{dimer}.p2	AK090021|Pla2g5|18784|phospholipase A2, group V	NM_001122954|Pla2g5|18784|phospholipase A2, group V
mm9_v1_chr6_-_54922563_54922606	0.976727	POU5F1_SOX2{dimer}.p2	NM_172729|Nod1|107607|nucleotide-binding oligomerization domain containing 1	AK137585|Nod1|107607|nucleotide-binding oligomerization domain containing 1
mm9_v1_chr9_-_121825407_121825416	0.971427	POU5F1_SOX2{dimer}.p2	BC049969|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	AF090317|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010973|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010974|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr12_-_105013969_105014153	0.971408	POU5F1_SOX2{dimer}.p2	BC049255|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B	BC106098|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr7_+_26682646_26682679	0.969291	POU5F1_SOX2{dimer}.p2	AK028103|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chrX_-_24728580_24728580	0.962751	POU5F1_SOX2{dimer}.p2	BC087929|Gm5169|382277|predicted gene 5169	NM_001040669|Gm5169|382277|predicted gene 5169
mm9_v1_chrX_-_26129763_26129763	0.962749	POU5F1_SOX2{dimer}.p2	BC048742|Gm14525|100039120|predicted gene 14525	NM_001162364|Gm14525|100039120|predicted gene 14525
mm9_v1_chr3_-_14778441_14778459	0.960379	POU5F1_SOX2{dimer}.p2	BC110681|Car1|12346|carbonic anhydrase 1	BC011223|Car1|12346|carbonic anhydrase 1	AK033719|Car1|12346|carbonic anhydrase 1	AK162331|Car1|12346|carbonic anhydrase 1	NM_001083957|Car1|12346|carbonic anhydrase 1
mm9_v1_chrX_+_147024463_147024599	0.960216	POU5F1_SOX2{dimer}.p2	AK132629|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	NM_008824|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	BC132561|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	BC132563|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm9_v1_chr19_-_34952377_34952406	0.958373	POU5F1_SOX2{dimer}.p2	AF200357|Pank1|75735|pantothenate kinase 1	AK050222|Pank1|75735|pantothenate kinase 1	NM_023792|Pank1|75735|pantothenate kinase 1
mm9_v1_chr6_+_122463595_122463620	0.953334	POU5F1_SOX2{dimer}.p2	AK011458|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr18_+_52775568_52775635	0.952025	POU5F1_SOX2{dimer}.p2	AK016749|Zfp474|66758|zinc finger protein 474	NM_025749|Zfp474|66758|zinc finger protein 474	BC055099|Zfp474|66758|zinc finger protein 474	AY350709|Zfp474|66758|zinc finger protein 474
mm9_v1_chr7_-_21060272_21060273	0.937941	POU5F1_SOX2{dimer}.p2	BC107204|Gm10670|100042971|predicted gene 10670	NM_001167160|Gm10665|100043058|predicted gene 10665	NM_001167161|Gm10670|100042971|predicted gene 10670
mm9_v1_chr5_+_73039034_73039056	0.935845	POU5F1_SOX2{dimer}.p2	AK075654|Nipal1|70701|NIPA-like domain containing 1	NM_001081205|Nipal1|70701|NIPA-like domain containing 1
mm9_v1_chr9_+_121643763_121643808	0.928164	POU5F1_SOX2{dimer}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chrX_-_26362794_26362794	0.926612	POU5F1_SOX2{dimer}.p2	NM_001104946|Gm2012|100039030|predicted gene 2012	NM_001114754|Gm6121|619991|predicted gene 6121
mm9_v1_chr5_+_76958331_76958438	0.923425	POU5F1_SOX2{dimer}.p2	BC064811|Exoc1|69940|exocyst complex component 1	NM_027270|Exoc1|69940|exocyst complex component 1	AK042620|Exoc1|69940|exocyst complex component 1	AK155980|Exoc1|69940|exocyst complex component 1	BC087543|Exoc1|69940|exocyst complex component 1	BC024678|Exoc1|69940|exocyst complex component 1
mm9_v1_chr3_-_113159420_113159575	0.916972	POU5F1_SOX2{dimer}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr19_+_23240506_23240595	0.914581	POU5F1_SOX2{dimer}.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr17_+_34462609_34462619	0.910854	POU5F1_SOX2{dimer}.p2	AK157199|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2	AK137912|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2	BC150834|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2	NM_001033978|H2-Eb2|381091|histocompatibility 2, class II antigen E beta2
mm9_v1_chr9_-_21571810_21571832	0.909813	POU5F1_SOX2{dimer}.p2	BC028803|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr11_-_48805585_48805759	0.909636	POU5F1_SOX2{dimer}.p2	L38444|Tgtp2|100039796|T-cell specific GTPase 2	U15636|Tgtp1|21822|T-cell specific GTPase 1	AK145236|Gm12185|620913|predicted gene 12185	BC034256|Tgtp1|21822|T-cell specific GTPase 1	BC085259|Tgtp1|21822|T-cell specific GTPase 1	BC093522|Tgtp1|21822|T-cell specific GTPase 1	AK089836|Tgtp1|21822|T-cell specific GTPase 1	AK163978|Tgtp1|21822|T-cell specific GTPase 1	AK172473|Tgtp1|21822|T-cell specific GTPase 1	AK172580|Tgtp2|100039796|T-cell specific GTPase 2	NM_011579|Tgtp1|21822|T-cell specific GTPase 1	NM_001145164|Tgtp2|100039796|T-cell specific GTPase 2	AK166353|Tgtp1|21822|T-cell specific GTPase 1
mm9_v1_chr14_-_56649331_56649331	0.906228	POU5F1_SOX2{dimer}.p2	AY007568|Mcpt9|17232|mast cell protease 9	NM_010782|Mcpt9|17232|mast cell protease 9
mm9_v1_chr5_+_149996135_149996309	0.906168	POU5F1_SOX2{dimer}.p2	NM_001013378|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115149|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115150|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115151|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115153|Uspl1|231915|ubiquitin specific peptidase like 1	AK050969|Uspl1|231915|ubiquitin specific peptidase like 1	AK145409|Uspl1|231915|ubiquitin specific peptidase like 1	BC028849|Uspl1|231915|ubiquitin specific peptidase like 1	AK168981|Uspl1|231915|ubiquitin specific peptidase like 1	AK146820|Uspl1|231915|ubiquitin specific peptidase like 1	AK168702|Uspl1|231915|ubiquitin specific peptidase like 1	AK088787|Uspl1|231915|ubiquitin specific peptidase like 1	AK161654|Uspl1|231915|ubiquitin specific peptidase like 1	BC086664|Uspl1|231915|ubiquitin specific peptidase like 1	AK179867|Uspl1|231915|ubiquitin specific peptidase like 1
mm9_v1_chr6_-_83486194_83486260	0.898557	POU5F1_SOX2{dimer}.p2	AK146631|Actg2|11468|actin, gamma 2, smooth muscle, enteric	AK168649|Actg2|11468|actin, gamma 2, smooth muscle, enteric	BC002042|Actg2|11468|actin, gamma 2, smooth muscle, enteric	NM_009610|Actg2|11468|actin, gamma 2, smooth muscle, enteric
mm9_v1_chr1_+_155756310_155756313	0.895851	POU5F1_SOX2{dimer}.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr16_-_4523051_4523052	0.89474	POU5F1_SOX2{dimer}.p2	AB113383|Srl|106393|sarcalumenin	NM_175347|Srl|106393|sarcalumenin
mm9_v1_chr9_+_7692089_7692096	0.889594	POU5F1_SOX2{dimer}.p2	L36244|Mmp7|17393|matrix metallopeptidase 7	AK144515|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr3_-_10208575_10208582	0.887661	POU5F1_SOX2{dimer}.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr14_-_20421808_20421808	0.885005	POU5F1_SOX2{dimer}.p2	BC060995|Gm5458|432825|predicted gene 5458	NM_001024706|Gm5458|432825|predicted gene 5458
mm9_v1_chr17_-_59152686_59152744	0.880809	POU5F1_SOX2{dimer}.p2	BC057657|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK147867|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK083846|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK002641|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	NM_026497|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12
mm9_v1_chr7_-_88711829_88711866	0.879234	POU5F1_SOX2{dimer}.p2	AK036674|Fsd2|244091|fibronectin type III and SPRY domain containing 2	AK028142|Fsd2|244091|fibronectin type III and SPRY domain containing 2	NM_172904|Fsd2|244091|fibronectin type III and SPRY domain containing 2
mm9_v1_chr8_+_38056628_38056675	0.877711	POU5F1_SOX2{dimer}.p2	NM_001039220|AI429214|621080|expressed sequence AI429214	AK161334|AI429214|621080|expressed sequence AI429214	AK132736|AI429214|621080|expressed sequence AI429214	BC150875|AI429214|621080|expressed sequence AI429214
mm9_v1_chr5_+_91503642_91503677	0.868304	POU5F1_SOX2{dimer}.p2	NM_007950|Ereg|13874|epiregulin	D30782|Ereg|13874|epiregulin	BC027838|Ereg|13874|epiregulin
mm9_v1_chr18_+_59222034_59222186	0.868133	POU5F1_SOX2{dimer}.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chr19_+_40164158_40164224	0.866817	POU5F1_SOX2{dimer}.p2	NM_001167875|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	NM_001167877|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	NM_134144|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	BC051050|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	BC011222|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	AY206873|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	AK149466|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50
mm9_v1_chrX_-_20639111_20639168	0.865749	POU5F1_SOX2{dimer}.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr6_-_129050920_129050933	0.865401	POU5F1_SOX2{dimer}.p2	BC051091|Clec2e|232409|C-type lectin domain family 2, member e	NM_153506|Clec2e|232409|C-type lectin domain family 2, member e
mm9_v1_chr17_-_34999458_34999467	0.862666	POU5F1_SOX2{dimer}.p2	NM_001142706|Cfb|14962|complement factor B	NM_008198|Cfb|14962|complement factor B
mm9_v1_chr5_-_97821348_97821397	0.860426	POU5F1_SOX2{dimer}.p2	AK135863|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	BC139104|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	BC145776|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	NM_001033191|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	AK133248|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	EU192141|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit
mm9_v1_chr1_+_160292665_160292848	0.855304	POU5F1_SOX2{dimer}.p2	AK147450|Astn1|11899|astrotactin 1	AK138576|Astn1|11899|astrotactin 1	AK045561|Astn1|11899|astrotactin 1	AK165200|Astn1|11899|astrotactin 1	U48797|Astn1|11899|astrotactin 1	AB093222|Astn1|11899|astrotactin 1
mm9_v1_chr12_+_110798661_110798666	0.854746	POU5F1_SOX2{dimer}.p2	AK019916|Meg3|17263|maternally expressed 3
mm9_v1_chr4_-_4004640_4004660	0.850911	POU5F1_SOX2{dimer}.p2	AK076465|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	BC125450|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	BC125452|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	NM_001080710|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6
mm9_v1_chr15_+_82000246_82000509	0.844856	POU5F1_SOX2{dimer}.p2	BC023333|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr15_+_6395353_6395370	0.838623	POU5F1_SOX2{dimer}.p2	X05475|C9|12279|complement component 9
mm9_v1_chr14_-_61877218_61877326	0.835642	POU5F1_SOX2{dimer}.p2	BC138960|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	BC138961|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AB024922|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AK132610|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AF282901|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	NM_011892|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)
mm9_v1_chr3_+_68376289_68376313	0.830827	POU5F1_SOX2{dimer}.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr9_+_7692110_7692113	0.830358	POU5F1_SOX2{dimer}.p2	BC119057|Mmp7|17393|matrix metallopeptidase 7	BC120655|Mmp7|17393|matrix metallopeptidase 7	NM_010810|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr3_-_92819586_92819610	0.830317	POU5F1_SOX2{dimer}.p2	BC060280|Crct1|74175|cysteine-rich C-terminal 1	AK009010|Crct1|74175|cysteine-rich C-terminal 1	NM_028798|Crct1|74175|cysteine-rich C-terminal 1
mm9_v1_chr8_-_25836259_25836296	0.826849	POU5F1_SOX2{dimer}.p2	BC049609|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	BC060975|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	BC129920|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	NM_009619|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	X64227|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)
mm9_v1_chr17_+_21672490_21672637	0.822934	POU5F1_SOX2{dimer}.p2	AK032299|Zfp52|22710|zinc finger protein 52	NM_144515|Zfp52|22710|zinc finger protein 52	BC021527|Zfp52|22710|zinc finger protein 52
mm9_v1_chr6_+_58781846_58781891	0.822826	POU5F1_SOX2{dimer}.p2	AK017531|Herc3|73998|hect domain and RLD 3
mm9_v1_chr2_+_32087125_32087136	0.822568	POU5F1_SOX2{dimer}.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr18_-_42900793_42900846	0.8128	POU5F1_SOX2{dimer}.p2	AF512670|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chrX_+_58962671_58962790	0.809881	POU5F1_SOX2{dimer}.p2	AK137057|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	BC052689|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	NM_001018087|Ldoc1|434784|leucine zipper, down-regulated in cancer 1
mm9_v1_chr8_-_25707414_25707480	0.809543	POU5F1_SOX2{dimer}.p2	BC049931|Ido1|15930|indoleamine 2,3-dioxygenase 1	M69109|Ido1|15930|indoleamine 2,3-dioxygenase 1	NM_008324|Ido1|15930|indoleamine 2,3-dioxygenase 1
mm9_v1_chr3_-_123210567_123210704	0.801531	POU5F1_SOX2{dimer}.p2	AK008369|Snhg8|69895|small nucleolar RNA host gene 8
mm9_v1_chr6_-_145383444_145383444	0.790102	POU5F1_SOX2{dimer}.p2	AK016641|Ifltd1|74071|intermediate filament tail domain containing 1	NM_028742|Ifltd1|74071|intermediate filament tail domain containing 1
mm9_v1_chr2_-_63936044_63936094	0.787265	POU5F1_SOX2{dimer}.p2	AF263913|Fign|60344|fidgetin	AK163474|Fign|60344|fidgetin	AK164536|Fign|60344|fidgetin	NM_021716|Fign|60344|fidgetin	AK143787|Fign|60344|fidgetin	BC059266|Fign|60344|fidgetin
mm9_v1_chr6_-_130079852_130079915	0.784093	POU5F1_SOX2{dimer}.p2	AK143236|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	NM_010650|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	AY338977|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AY338978|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116399|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116400|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AF288380|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_053151|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_001101620|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8
mm9_v1_chr11_-_106642684_106642809	0.783943	POU5F1_SOX2{dimer}.p2	AK149022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr9_+_3404047_3404117	0.772314	POU5F1_SOX2{dimer}.p2	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr7_+_97535490_97535508	0.758317	POU5F1_SOX2{dimer}.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr13_-_27482665_27482714	0.758066	POU5F1_SOX2{dimer}.p2	AF525155|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC100329|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC138199|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC111112|Prl2b1|66392|prolactin family 2, subfamily b, member 1	AK009863|Prl2b1|66392|prolactin family 2, subfamily b, member 1	AK005411|Prl2b1|66392|prolactin family 2, subfamily b, member 1	NM_025532|Prl2b1|66392|prolactin family 2, subfamily b, member 1
mm9_v1_chr1_+_160292470_160292548	0.757943	POU5F1_SOX2{dimer}.p2	AK164117|Astn1|11899|astrotactin 1	NM_007495|Astn1|11899|astrotactin 1	BC094666|Astn1|11899|astrotactin 1
mm9_v1_chr5_+_93112640_93112650	0.749317	POU5F1_SOX2{dimer}.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr13_-_61043271_61043296	0.749213	POU5F1_SOX2{dimer}.p2	AY034575|Tpbpa|21984|trophoblast specific protein alpha	BC099391|Tpbpa|21984|trophoblast specific protein alpha	X17071|Tpbpa|21984|trophoblast specific protein alpha	AK160140|Tpbpa|21984|trophoblast specific protein alpha	AK018825|Tpbpa|21984|trophoblast specific protein alpha	AK005438|Tpbpa|21984|trophoblast specific protein alpha	AK018800|Tpbpa|21984|trophoblast specific protein alpha	AK018802|Tpbpa|21984|trophoblast specific protein alpha	AK028071|Tpbpa|21984|trophoblast specific protein alpha	AK005406|Tpbpa|21984|trophoblast specific protein alpha	AK005417|Tpbpa|21984|trophoblast specific protein alpha	AK005446|Tpbpa|21984|trophoblast specific protein alpha	AK005499|Tpbpa|21984|trophoblast specific protein alpha	AK011401|Tpbpa|21984|trophoblast specific protein alpha	AK014443|Tpbpa|21984|trophoblast specific protein alpha	AK018797|Tpbpa|21984|trophoblast specific protein alpha	AK018803|Tpbpa|21984|trophoblast specific protein alpha	AK018806|Tpbpa|21984|trophoblast specific protein alpha	AK018807|Tpbpa|21984|trophoblast specific protein alpha	AK018811|Tpbpa|21984|trophoblast specific protein alpha	AK018812|Tpbpa|21984|trophoblast specific protein alpha	AK018813|Tpbpa|21984|trophoblast specific protein alpha	AK018814|Tpbpa|21984|trophoblast specific protein alpha	AK018815|Tpbpa|21984|trophoblast specific protein alpha	AK018819|Tpbpa|21984|trophoblast specific protein alpha	AK018821|Tpbpa|21984|trophoblast specific protein alpha	AK018823|Tpbpa|21984|trophoblast specific protein alpha	AK018826|Tpbpa|21984|trophoblast specific protein alpha	NM_009411|Tpbpa|21984|trophoblast specific protein alpha	AK005454|Tpbpa|21984|trophoblast specific protein alpha	AK018822|Tpbpa|21984|trophoblast specific protein alpha
mm9_v1_chr5_-_87964170_87964216	0.746956	POU5F1_SOX2{dimer}.p2	BC024361|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr12_+_110834872_110834878	0.746951	POU5F1_SOX2{dimer}.p2	AK038654|1110006E14Rik|76286|RIKEN cDNA 1110006E14 gene
mm9_v1_chr18_-_70212948_70213022	0.744392	POU5F1_SOX2{dimer}.p2	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr5_-_139060952_139060970	0.736957	POU5F1_SOX2{dimer}.p2	AB024005|Zfp68|24135|zinc finger protein 68	BC018171|Zfp68|24135|zinc finger protein 68	AK013868|Zfp68|24135|zinc finger protein 68	NM_001044747|Zfp68|24135|zinc finger protein 68	NM_001163797|Zfp68|24135|zinc finger protein 68	NM_013844|Zfp68|24135|zinc finger protein 68
mm9_v1_chr7_+_125777249_125777358	0.732267	POU5F1_SOX2{dimer}.p2	AY263159|Tmc5|74424|transmembrane channel-like gene family 5	NM_028930|Tmc5|74424|transmembrane channel-like gene family 5	AK016573|Tmc5|74424|transmembrane channel-like gene family 5	AY236495|Tmc5|74424|transmembrane channel-like gene family 5
mm9_v1_chr15_-_75893123_75893176	0.731841	POU5F1_SOX2{dimer}.p2	BC006859|Scrib|105782|scribbled homolog (Drosophila)
mm9_v1_chr6_+_112223751_112223811	0.713906	POU5F1_SOX2{dimer}.p2	AK075847|Lmcd1|30937|LIM and cysteine-rich domains 1	NM_144799|Lmcd1|30937|LIM and cysteine-rich domains 1	AK159946|Lmcd1|30937|LIM and cysteine-rich domains 1	BC019124|Lmcd1|30937|LIM and cysteine-rich domains 1
mm9_v1_chr8_-_25934840_25934840	0.713872	POU5F1_SOX2{dimer}.p2	AK161262|Adam5|11499|a disintegrin and metallopeptidase domain 5	NM_007401|Adam5|11499|a disintegrin and metallopeptidase domain 5
mm9_v1_chr10_-_116782524_116782604	0.712415	POU5F1_SOX2{dimer}.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr5_-_31495457_31495511	0.712117	POU5F1_SOX2{dimer}.p2	M98036|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	NM_001127355|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	NM_001127356|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	NM_010122|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta
mm9_v1_chr13_-_61006182_61006207	0.706835	POU5F1_SOX2{dimer}.p2	AY034576|Tpbpb|116913|trophoblast specific protein beta	BC099441|Tpbpb|116913|trophoblast specific protein beta	BC100333|Tpbpb|116913|trophoblast specific protein beta	AK018794|Tpbpb|116913|trophoblast specific protein beta	AK005433|Tpbpb|116913|trophoblast specific protein beta	AK018793|Tpbpb|116913|trophoblast specific protein beta	AK018795|Tpbpb|116913|trophoblast specific protein beta	AK018798|Tpbpb|116913|trophoblast specific protein beta	AK018799|Tpbpb|116913|trophoblast specific protein beta	AK018805|Tpbpb|116913|trophoblast specific protein beta	AK018809|Tpbpb|116913|trophoblast specific protein beta	AK018810|Tpbpb|116913|trophoblast specific protein beta	AK018817|Tpbpb|116913|trophoblast specific protein beta	AK018820|Tpbpb|116913|trophoblast specific protein beta	AK018824|Tpbpb|116913|trophoblast specific protein beta	AK018827|Tpbpb|116913|trophoblast specific protein beta	AK018804|Tpbpb|116913|trophoblast specific protein beta	AK018808|Tpbpb|116913|trophoblast specific protein beta	NM_026429|Tpbpb|116913|trophoblast specific protein beta
mm9_v1_chr15_+_66409094_66409201	0.706107	POU5F1_SOX2{dimer}.p2	AK047044|Phf20l1|239510|PHD finger protein 20-like 1	AK032638|Phf20l1|239510|PHD finger protein 20-like 1	NM_001081409|Phf20l1|239510|PHD finger protein 20-like 1	BC082777|Phf20l1|239510|PHD finger protein 20-like 1	BC052212|Phf20l1|239510|PHD finger protein 20-like 1	BC061492|Phf20l1|239510|PHD finger protein 20-like 1
mm9_v1_chr17_-_36505355_36505361	0.701521	POU5F1_SOX2{dimer}.p2	AF539599|H2-M10.3|110696|histocompatibility 2, M region locus 10.3	AY211080|H2-M10.3|110696|histocompatibility 2, M region locus 10.3	NM_201608|H2-M10.3|110696|histocompatibility 2, M region locus 10.3
mm9_v1_chr15_+_80629020_80629144	0.69911	POU5F1_SOX2{dimer}.p2	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr5_+_38126757_38126797	0.691725	POU5F1_SOX2{dimer}.p2	NM_001081106|Cytl1|231162|cytokine-like 1	BC116224|Cytl1|231162|cytokine-like 1	BC116225|Cytl1|231162|cytokine-like 1	EF108311|Cytl1|231162|cytokine-like 1	BC063103|Cytl1|231162|cytokine-like 1
mm9_v1_chr16_-_89488129_89488198	0.682428	POU5F1_SOX2{dimer}.p2	D86423|Krtap8-1|16703|keratin associated protein 8-1	AK133727|Krtap8-1|16703|keratin associated protein 8-1	NM_010675|Krtap8-1|16703|keratin associated protein 8-1
mm9_v1_chr5_-_73143979_73144015	0.674338	POU5F1_SOX2{dimer}.p2	U16145|Txk|22165|TXK tyrosine kinase	AK088209|Txk|22165|TXK tyrosine kinase	AK138069|Txk|22165|TXK tyrosine kinase	AK138786|Txk|22165|TXK tyrosine kinase	NM_001122754|Txk|22165|TXK tyrosine kinase	U19607|Txk|22165|TXK tyrosine kinase
mm9_v1_chr1_-_138850206_138850206	0.673915	POU5F1_SOX2{dimer}.p2	DQ133942|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_001159769|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr19_+_11566527_11566537	0.669506	POU5F1_SOX2{dimer}.p2	NM_001164202|Gm8369|666926|predicted gene 8369
mm9_v1_chr8_+_15057652_15057677	0.664745	POU5F1_SOX2{dimer}.p2	AJ001038|Myom2|17930|myomesin 2	NM_008664|Myom2|17930|myomesin 2	BC115722|Myom2|17930|myomesin 2	BC115834|Myom2|17930|myomesin 2	AK142174|Myom2|17930|myomesin 2
mm9_v1_chr10_-_5734448_5734544	0.660233	POU5F1_SOX2{dimer}.p2	EU791538|Esr1|13982|estrogen receptor 1 (alpha)	AK036627|Esr1|13982|estrogen receptor 1 (alpha)	NM_007956|Esr1|13982|estrogen receptor 1 (alpha)	AJ272164|Esr1|13982|estrogen receptor 1 (alpha)	AK039911|Esr1|13982|estrogen receptor 1 (alpha)	AK041525|Esr1|13982|estrogen receptor 1 (alpha)	AK033270|Esr1|13982|estrogen receptor 1 (alpha)
mm9_v1_chr1_+_133535033_133535043	0.659261	POU5F1_SOX2{dimer}.p2	AK145875|Ctse|13034|cathepsin E
mm9_v1_chr4_-_118846460_118846468	0.658877	POU5F1_SOX2{dimer}.p2	AK032431|Zfp691|195522|zinc finger protein 691	AK171649|Zfp691|195522|zinc finger protein 691	NM_001145935|Zfp691|195522|zinc finger protein 691	NM_183140|Zfp691|195522|zinc finger protein 691
mm9_v1_chr14_+_3500819_3500830	0.644459	POU5F1_SOX2{dimer}.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_3740222_3740233	0.644459	POU5F1_SOX2{dimer}.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_6956219_6956230	0.644459	POU5F1_SOX2{dimer}.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr13_+_58910051_58910106	0.641275	POU5F1_SOX2{dimer}.p2	AB377224|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	AB377225|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	AK009606|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	M33385|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr2_+_110561733_110561771	0.637227	POU5F1_SOX2{dimer}.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr9_-_99610427_99610465	0.635204	POU5F1_SOX2{dimer}.p2	AF349450|Cldn18|56492|claudin 18	AF221068|Cldn18|56492|claudin 18
mm9_v1_chr3_-_151828863_151828923	0.62901	POU5F1_SOX2{dimer}.p2	AF061262|Gipc2|54120|GIPC PDZ domain containing family, member 2	NM_016867|Gipc2|54120|GIPC PDZ domain containing family, member 2	AK008626|Gipc2|54120|GIPC PDZ domain containing family, member 2	AK168560|Gipc2|54120|GIPC PDZ domain containing family, member 2	BC013440|Gipc2|54120|GIPC PDZ domain containing family, member 2
mm9_v1_chr14_+_52172464_52172464	0.622706	POU5F1_SOX2{dimer}.p2	BC049649|Gm5622|434459|predicted gene 5622	NM_001013816|Gm5622|434459|predicted gene 5622
mm9_v1_chr5_-_71939438_71939443	0.622613	POU5F1_SOX2{dimer}.p2	BC059709|Cox7b2|78174|cytochrome c oxidase subunit VIIb2	AK019665|Cox7b2|78174|cytochrome c oxidase subunit VIIb2	AK076833|Cox7b2|78174|cytochrome c oxidase subunit VIIb2	NM_030052|Cox7b2|78174|cytochrome c oxidase subunit VIIb2
mm9_v1_chr6_+_41488583_41488591	0.619524	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr12_-_114167705_114167755	0.617849	POU5F1_SOX2{dimer}.p2	AF038572|Jag2|16450|jagged 2	NM_010588|Jag2|16450|jagged 2
mm9_v1_chr2_+_155207542_155207579	0.616102	POU5F1_SOX2{dimer}.p2	AK170132|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_+_62692976_62693095	0.611684	POU5F1_SOX2{dimer}.p2	AK077277|Fam18b|67510|family with sequence similarity 18, member B	NM_026210|Fam18b|67510|family with sequence similarity 18, member B	AK150936|Fam18b|67510|family with sequence similarity 18, member B	BC115504|Fam18b|67510|family with sequence similarity 18, member B	BC115505|Fam18b|67510|family with sequence similarity 18, member B	AK007707|Fam18b|67510|family with sequence similarity 18, member B	AK017572|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr16_-_96413824_96413863	0.609254	POU5F1_SOX2{dimer}.p2	AK031481|Lca5l|385668|Leber congenital amaurosis 5-like	AK029554|Lca5l|385668|Leber congenital amaurosis 5-like	AK133316|Lca5l|385668|Leber congenital amaurosis 5-like	NM_001001492|Lca5l|385668|Leber congenital amaurosis 5-like
mm9_v1_chr5_-_44162032_44162072	0.600884	POU5F1_SOX2{dimer}.p2	BC023291|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr11_-_101755622_101755677	0.597091	POU5F1_SOX2{dimer}.p2	Z15103|Meox1|17285|mesenchyme homeobox 1	BC011082|Meox1|17285|mesenchyme homeobox 1	NM_010791|Meox1|17285|mesenchyme homeobox 1	AK052370|Meox1|17285|mesenchyme homeobox 1
mm9_v1_chr7_-_54444724_54444785	0.597064	POU5F1_SOX2{dimer}.p2	NM_205821|Mrgpra6|381886|MAS-related GPR, member A6	BC132198|Mrgpra6|381886|MAS-related GPR, member A6	BC132204|Mrgpra6|381886|MAS-related GPR, member A6
mm9_v1_chr10_+_117878101_117878253	0.591514	POU5F1_SOX2{dimer}.p2	M28621|Ifng|15978|interferon gamma	AK089574|Ifng|15978|interferon gamma	NM_008337|Ifng|15978|interferon gamma	K00083|Ifng|15978|interferon gamma	FJ617514|Ifng|15978|interferon gamma	FJ617515|Ifng|15978|interferon gamma	FJ617516|Ifng|15978|interferon gamma	BC119063|Ifng|15978|interferon gamma	BC119065|Ifng|15978|interferon gamma	EF423643|Ifng|15978|interferon gamma	AY423847|Ifng|15978|interferon gamma
mm9_v1_chr2_+_85791221_85791221	0.590704	POU5F1_SOX2{dimer}.p2	NM_001011774|Olfr1028|257936|olfactory receptor 1028
mm9_v1_chr7_+_19576593_19576667	0.589608	POU5F1_SOX2{dimer}.p2	NM_145579|Mypop|232934|Myb-related transcription factor, partner of profilin	M82902|Mypop|232934|Myb-related transcription factor, partner of profilin	AF364868|Mypop|232934|Myb-related transcription factor, partner of profilin
mm9_v1_chr12_+_10376776_10376849	0.58942	POU5F1_SOX2{dimer}.p2	NM_027588|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AK014892|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	BC060976|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AF356186|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AJ295253|Nt5c1b|70881|5'-nucleotidase, cytosolic IB
mm9_v1_chr14_+_73637697_73637874	0.585849	POU5F1_SOX2{dimer}.p2	NM_175116|Lpar6|67168|lysophosphatidic acid receptor 6	AK032901|Lpar6|67168|lysophosphatidic acid receptor 6	AK011967|Lpar6|67168|lysophosphatidic acid receptor 6	AK169602|Lpar6|67168|lysophosphatidic acid receptor 6	BC047931|Lpar6|67168|lysophosphatidic acid receptor 6	AK008952|Lpar6|67168|lysophosphatidic acid receptor 6	BC057175|Lpar6|67168|lysophosphatidic acid receptor 6	BC069991|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr1_-_172040621_172040689	0.584686	POU5F1_SOX2{dimer}.p2	BC138826|Ddr2|18214|discoidin domain receptor family, member 2	BC138827|Ddr2|18214|discoidin domain receptor family, member 2	X76505|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chrX_+_9424072_9424114	0.579017	POU5F1_SOX2{dimer}.p2	AK006788|1700054O13Rik|67334|RIKEN cDNA 1700054O13 gene	NM_026096|1700054O13Rik|67334|RIKEN cDNA 1700054O13 gene	AK006319|1700054O13Rik|67334|RIKEN cDNA 1700054O13 gene	BC059721|1700054O13Rik|67334|RIKEN cDNA 1700054O13 gene	BC049569|1700054O13Rik|67334|RIKEN cDNA 1700054O13 gene
mm9_v1_chr13_-_32873647_32873647	0.563109	POU5F1_SOX2{dimer}.p2	NM_001166030|Mylk4|238564|myosin light chain kinase family, member 4
mm9_v1_chr3_-_122737855_122737904	0.560202	POU5F1_SOX2{dimer}.p2	AK003634|Myoz2|59006|myozenin 2	AJ252148|Myoz2|59006|myozenin 2	BC024360|Myoz2|59006|myozenin 2	AY013296|Myoz2|59006|myozenin 2	AK085927|Myoz2|59006|myozenin 2	NM_021503|Myoz2|59006|myozenin 2
mm9_v1_chr5_+_7304126_7304163	0.5597	POU5F1_SOX2{dimer}.p2	BC049718|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK133311|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK014870|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	AK076678|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene	NM_027603|4921511H03Rik|70920|RIKEN cDNA 4921511H03 gene
mm9_v1_chr10_+_127196776_127196901	0.552889	POU5F1_SOX2{dimer}.p2	AK136574|Rdh1|107605|retinol dehydrogenase 1 (all trans)	NM_080436|Rdh1|107605|retinol dehydrogenase 1 (all trans)	AK132181|Rdh9|103142|retinol dehydrogenase 9	AY028928|Rdh1|107605|retinol dehydrogenase 1 (all trans)	BC137930|Rdh1|107605|retinol dehydrogenase 1 (all trans)
mm9_v1_chr6_+_125271356_125271401	0.539962	POU5F1_SOX2{dimer}.p2	AK140389|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha	NM_011324|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha	BC022748|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha
mm9_v1_chr16_-_21153958_21154072	0.538899	POU5F1_SOX2{dimer}.p2	AK009367|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009777|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009766|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009984|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	BC115655|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	BC115656|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009496|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009632|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009635|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK010016|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009997|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009566|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	NM_025634|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009751|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene
mm9_v1_chr9_-_82826139_82826181	0.538821	POU5F1_SOX2{dimer}.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr16_+_62814501_62814570	0.538221	POU5F1_SOX2{dimer}.p2	BC023414|Stx19|68159|syntaxin 19	NM_026588|Stx19|68159|syntaxin 19	AK020701|Stx19|68159|syntaxin 19	AK076337|Stx19|68159|syntaxin 19
mm9_v1_chr16_-_59555577_59555577	0.537703	POU5F1_SOX2{dimer}.p2	BC043118|Crybg3|224273|beta-gamma crystallin domain containing 3	NM_174848|Crybg3|224273|beta-gamma crystallin domain containing 3
mm9_v1_chr5_+_88431549_88431605	0.537575	POU5F1_SOX2{dimer}.p2	NM_011422|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71629|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71631|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC035428|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC034553|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC055857|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031806|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC141243|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC145569|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031921|Smr3a|20599|submaxillary gland androgen regulated protein 3A
mm9_v1_chr12_+_66018897_66018897	0.53535	POU5F1_SOX2{dimer}.p2	BC099503|Gm527|217648|predicted gene 527	NM_001025605|Gm527|217648|predicted gene 527
mm9_v1_chr9_-_114549261_114549332	0.534392	POU5F1_SOX2{dimer}.p2	BC036179|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC039183|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK171701|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK161842|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr10_-_24919916_24919967	0.530203	POU5F1_SOX2{dimer}.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr3_-_10197187_10197261	0.523704	POU5F1_SOX2{dimer}.p2	AK161314|Fabp9|21884|fatty acid binding protein 9, testis	AK005745|Fabp9|21884|fatty acid binding protein 9, testis	BC048437|Fabp9|21884|fatty acid binding protein 9, testis	NM_011598|Fabp9|21884|fatty acid binding protein 9, testis
mm9_v1_chr1_-_171677653_171677778	0.518537	POU5F1_SOX2{dimer}.p2	AB004315|Rgs4|19736|regulator of G-protein signaling 4	BC003882|Rgs4|19736|regulator of G-protein signaling 4	BC055293|Rgs4|19736|regulator of G-protein signaling 4	AK030536|Rgs4|19736|regulator of G-protein signaling 4	AK039134|Rgs4|19736|regulator of G-protein signaling 4	DQ346659|Rgs4|19736|regulator of G-protein signaling 4	DQ346660|Rgs4|19736|regulator of G-protein signaling 4	DQ346661|Rgs4|19736|regulator of G-protein signaling 4	NM_009062|Rgs4|19736|regulator of G-protein signaling 4
mm9_v1_chr3_-_117063090_117063169	0.505807	POU5F1_SOX2{dimer}.p2	AK079635|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr6_-_40981647_40981696	0.503341	POU5F1_SOX2{dimer}.p2	AK007775|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene
mm9_v1_chr10_+_101837068_101837081	0.502768	POU5F1_SOX2{dimer}.p2	AK018672|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK033482|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_026243|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK018574|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	BC046987|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr17_-_53985142_53985282	0.502348	POU5F1_SOX2{dimer}.p2	AK007384|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	AK144336|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	BC022665|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	AY005469|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	NM_026935|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2
mm9_v1_chr3_+_105916283_105916305	0.501086	POU5F1_SOX2{dimer}.p2	AK007573|Chia|81600|chitinase, acidic	AK008633|Chia|81600|chitinase, acidic	AK008650|Chia|81600|chitinase, acidic	AK008757|Chia|81600|chitinase, acidic	AK160173|Chia|81600|chitinase, acidic	BC034548|Chia|81600|chitinase, acidic	NM_023186|Chia|81600|chitinase, acidic	AF290003|Chia|81600|chitinase, acidic	DQ349202|Chia|81600|chitinase, acidic	EF094027|Chia|81600|chitinase, acidic	BC011134|Chia|81600|chitinase, acidic	AF154571|Chia|81600|chitinase, acidic
mm9_v1_chr11_+_98603186_98603266	0.500227	POU5F1_SOX2{dimer}.p2	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr18_+_37849488_37849707	0.499564	POU5F1_SOX2{dimer}.p2	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr13_+_27351357_27351420	0.496213	POU5F1_SOX2{dimer}.p2	AK005474|Prl3a1|67000|prolactin family 3, subfamily a, member 1	NM_025896|Prl3a1|67000|prolactin family 3, subfamily a, member 1	AK005567|Prl3a1|67000|prolactin family 3, subfamily a, member 1	AF525154|Prl3a1|67000|prolactin family 3, subfamily a, member 1	BC100334|Prl3a1|67000|prolactin family 3, subfamily a, member 1
mm9_v1_chr9_-_105999021_105999113	0.494214	POU5F1_SOX2{dimer}.p2	AM231151|Col6a4|68553|collagen, type VI, alpha 4	NM_026763|Col6a4|68553|collagen, type VI, alpha 4	AB370265|Col6a4|68553|collagen, type VI, alpha 4
mm9_v1_chr3_-_137849636_137849676	0.491195	POU5F1_SOX2{dimer}.p2	BC150693|4930579F01Rik|67741|RIKEN cDNA 4930579F01 gene	AK016318|4930579F01Rik|67741|RIKEN cDNA 4930579F01 gene	NM_001163385|4930579F01Rik|67741|RIKEN cDNA 4930579F01 gene	NM_001163386|4930579F01Rik|67741|RIKEN cDNA 4930579F01 gene
mm9_v1_chr7_+_114710946_114710987	0.490657	POU5F1_SOX2{dimer}.p2	NM_172907|Olfml1|244198|olfactomedin-like 1	BC047207|Olfml1|244198|olfactomedin-like 1	AK032948|Olfml1|244198|olfactomedin-like 1
mm9_v1_chr9_-_99610481_99610525	0.489252	POU5F1_SOX2{dimer}.p2	NM_001194922|Cldn18|56492|claudin 18	NM_019815|Cldn18|56492|claudin 18
mm9_v1_chr10_+_7512691_7512745	0.484339	POU5F1_SOX2{dimer}.p2	AK017370|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	NM_026141|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014453|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK011443|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK013377|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014406|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK049634|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK164127|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167258|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK012371|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167168|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	BC079912|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4
mm9_v1_chr19_-_40261753_40261779	0.482257	POU5F1_SOX2{dimer}.p2	BC022151|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC023894|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AY227736|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC034831|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC016494|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AK050082|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	NM_145499|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70
mm9_v1_chr10_-_81233886_81233926	0.480721	POU5F1_SOX2{dimer}.p2	BC062127|Zfp781|331188|zinc finger protein 781	NM_199062|Zfp781|331188|zinc finger protein 781	AK047840|4933439G19Rik|414080|RIKEN cDNA 4933439G19 gene
mm9_v1_chr10_-_81393224_81393264	0.480721	POU5F1_SOX2{dimer}.p2	BC062127|Zfp781|331188|zinc finger protein 781	NM_199062|Zfp781|331188|zinc finger protein 781	AK047840|4933439G19Rik|414080|RIKEN cDNA 4933439G19 gene
mm9_v1_chr19_-_44103644_44103736	0.479751	POU5F1_SOX2{dimer}.p2	BC024068|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC034834|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC022141|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC025819|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC026766|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK050436|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK149451|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001001446|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001167905|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44
mm9_v1_chr17_-_65991507_65991543	0.478589	POU5F1_SOX2{dimer}.p2	BC060981|Txndc2|213272|thioredoxin domain containing 2 (spermatozoa)	NM_001146002|Txndc2|213272|thioredoxin domain containing 2 (spermatozoa)
mm9_v1_chr17_-_7997838_7997838	0.478149	POU5F1_SOX2{dimer}.p2	NM_001081416|Fndc1|68655|fibronectin type III domain containing 1
mm9_v1_chr18_-_68588897_68588973	0.477579	POU5F1_SOX2{dimer}.p2	AK033100|Mc2r|17200|melanocortin 2 receptor	NM_008560|Mc2r|17200|melanocortin 2 receptor	D85688|Mc2r|17200|melanocortin 2 receptor
mm9_v1_chr7_+_24416996_24417006	0.476791	POU5F1_SOX2{dimer}.p2	AF324871|Vmn1r171|81012|vomeronasal 1 receptor 171	BC111911|Vmn1r171|81012|vomeronasal 1 receptor 171	NM_030737|Vmn1r171|81012|vomeronasal 1 receptor 171
mm9_v1_chr17_-_37706393_37706395	0.472644	POU5F1_SOX2{dimer}.p2	AK029968|Olfr112|258096|olfactory receptor 112	NM_001013575|Olfr112|258096|olfactory receptor 112	AK016338|Olfr112|258096|olfactory receptor 112
mm9_v1_chr1_+_61034757_61034802	0.471293	POU5F1_SOX2{dimer}.p2	NM_017480|Icos|54167|inducible T-cell co-stimulator	AK030827|Icos|54167|inducible T-cell co-stimulator	AJ250559|Icos|54167|inducible T-cell co-stimulator	BC034852|Icos|54167|inducible T-cell co-stimulator	AB023132|Icos|54167|inducible T-cell co-stimulator	AF257230|Icos|54167|inducible T-cell co-stimulator	AF216748|Icos|54167|inducible T-cell co-stimulator
mm9_v1_chr18_+_78016353_78016381	0.470237	POU5F1_SOX2{dimer}.p2	AK164193|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr12_+_83412335_83412335	0.469507	POU5F1_SOX2{dimer}.p2	NM_172579|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1
mm9_v1_chr10_-_4752710_4752812	0.469118	POU5F1_SOX2{dimer}.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr9_+_88475873_88475994	0.461711	POU5F1_SOX2{dimer}.p2	AK145647|Trim43a|547109|tripartite motif-containing 43A	NM_001034906|Trim43a|547109|tripartite motif-containing 43A	AK166678|Trim43a|547109|tripartite motif-containing 43A	BC141236|Trim43a|547109|tripartite motif-containing 43A
mm9_v1_chr13_+_42775991_42775991	0.461104	POU5F1_SOX2{dimer}.p2	NM_198419|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr9_-_96978102_96978110	0.46016	POU5F1_SOX2{dimer}.p2	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr6_-_120314373_120314396	0.4573	POU5F1_SOX2{dimer}.p2	AK031590|Ccdc77|67200|coiled-coil domain containing 77
mm9_v1_chr14_+_51710751_51710835	0.456222	POU5F1_SOX2{dimer}.p2	NM_001161731|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_021472|Rnase4|58809|ribonuclease, RNase A family 4	AK076504|Rnase4|58809|ribonuclease, RNase A family 4	BC066843|Rnase4|58809|ribonuclease, RNase A family 4	AK171251|Ang|11727|angiogenin, ribonuclease, RNase A family, 5
mm9_v1_chr8_+_3665753_3665761	0.456114	POU5F1_SOX2{dimer}.p2	AK007679|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene	AK087121|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene	AK036449|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene	NM_026985|1810033B17Rik|69189|RIKEN cDNA 1810033B17 gene
mm9_v1_chr2_+_136327645_136327733	0.455285	POU5F1_SOX2{dimer}.p2	AK040732|BC034902|228642|cDNA sequence BC034902	BC034902|BC034902|228642|cDNA sequence BC034902
mm9_v1_chr18_+_37839910_37840111	0.454582	POU5F1_SOX2{dimer}.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr1_-_167523348_167523717	0.451788	POU5F1_SOX2{dimer}.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr7_-_24993103_24993167	0.451201	POU5F1_SOX2{dimer}.p2	BC005456|Zfp111|56707|zinc finger protein 111	AK135436|Zfp111|56707|zinc finger protein 111	NM_019940|Zfp111|56707|zinc finger protein 111
mm9_v1_chr2_+_131763454_131763725	0.4501	POU5F1_SOX2{dimer}.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr5_+_31754808_31754902	0.448345	POU5F1_SOX2{dimer}.p2	NM_172993|Zfp512|269639|zinc finger protein 512	AK173267|Zfp512|269639|zinc finger protein 512	AK146353|Zfp512|269639|zinc finger protein 512	AK084205|Zfp512|269639|zinc finger protein 512	AK149921|Zfp512|269639|zinc finger protein 512	AK154918|Zfp512|269639|zinc finger protein 512	BC089160|Zfp512|269639|zinc finger protein 512	BC066136|Zfp512|269639|zinc finger protein 512
mm9_v1_chr11_+_43534658_43534687	0.446527	POU5F1_SOX2{dimer}.p2	AK086604|Pwwp2a|70802|PWWP domain containing 2A	AK039984|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr17_-_33276627_33276627	0.445677	POU5F1_SOX2{dimer}.p2	AK077016|Morc2b|240069|microrchidia 2B	NM_177719|Morc2b|240069|microrchidia 2B
mm9_v1_chr18_-_44821919_44821954	0.445431	POU5F1_SOX2{dimer}.p2	AK054528|Mcc|328949|mutated in colorectal cancers	NM_001085374|Mcc|328949|mutated in colorectal cancers	AK086823|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr10_+_69488049_69488073	0.445161	POU5F1_SOX2{dimer}.p2	AK013684|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr9_-_103190558_103190644	0.443411	POU5F1_SOX2{dimer}.p2	BC021390|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	AK005035|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	AK076237|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	NM_027918|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene
mm9_v1_chrX_+_29130521_29130581	0.442818	POU5F1_SOX2{dimer}.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chr10_-_88067758_88067896	0.438739	POU5F1_SOX2{dimer}.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr19_+_53214934_53215104	0.421299	POU5F1_SOX2{dimer}.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr9_-_104028940_104028972	0.419906	POU5F1_SOX2{dimer}.p2	BC110556|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	BC140999|Ccrl1|252837|chemokine (C-C motif) receptor-like 1	NM_145700|Ccrl1|252837|chemokine (C-C motif) receptor-like 1
mm9_v1_chrX_-_26904190_26904250	0.418186	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486
mm9_v1_chrX_-_24498453_24498513	0.418186	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486
mm9_v1_chrX_-_22797942_22797952	0.418104	POU5F1_SOX2{dimer}.p2	AK013399|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chr2_-_113878535_113878550	0.41691	POU5F1_SOX2{dimer}.p2	BC062138|Actc1|11464|actin, alpha, cardiac muscle 1	AK014303|Actc1|11464|actin, alpha, cardiac muscle 1	AK146496|Actc1|11464|actin, alpha, cardiac muscle 1	AK146899|Actc1|11464|actin, alpha, cardiac muscle 1	AK168637|Actc1|11464|actin, alpha, cardiac muscle 1	AK168661|Actc1|11464|actin, alpha, cardiac muscle 1	AK168831|Actc1|11464|actin, alpha, cardiac muscle 1	AK169161|Actc1|11464|actin, alpha, cardiac muscle 1	AK169165|Actc1|11464|actin, alpha, cardiac muscle 1	BC100600|Actc1|11464|actin, alpha, cardiac muscle 1	NM_009608|Actc1|11464|actin, alpha, cardiac muscle 1	AK014307|Actc1|11464|actin, alpha, cardiac muscle 1
mm9_v1_chr11_+_58777282_58777303	0.41369	POU5F1_SOX2{dimer}.p2	BC055112|Trim17|56631|tripartite motif-containing 17	NM_031172|Trim17|56631|tripartite motif-containing 17	AK077212|Trim17|56631|tripartite motif-containing 17
mm9_v1_chr10_-_126700105_126700237	0.412035	POU5F1_SOX2{dimer}.p2	AF067179|Kif5a|16572|kinesin family member 5A	AK147660|Kif5a|16572|kinesin family member 5A	BC058396|Kif5a|16572|kinesin family member 5A	AK147707|Kif5a|16572|kinesin family member 5A	BC027115|Kif5a|16572|kinesin family member 5A	AK147352|Kif5a|16572|kinesin family member 5A
mm9_v1_chr8_-_64381465_64381486	0.408047	POU5F1_SOX2{dimer}.p2	AK052489|Palld|72333|palladin, cytoskeletal associated protein	NM_001081390|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr12_+_118896501_118896507	0.40758	POU5F1_SOX2{dimer}.p2	AK083591|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr7_-_127813763_127813856	0.406837	POU5F1_SOX2{dimer}.p2	AK006727|Pdzd9|67983|PDZ domain containing 9	AK015115|Pdzd9|67983|PDZ domain containing 9	AK015578|Pdzd9|67983|PDZ domain containing 9	AK017019|Pdzd9|67983|PDZ domain containing 9	NM_001040137|Pdzd9|67983|PDZ domain containing 9	BC147551|Pdzd9|67983|PDZ domain containing 9	BC147563|Pdzd9|67983|PDZ domain containing 9	BC172089|Pdzd9|67983|PDZ domain containing 9	AK005921|Pdzd9|67983|PDZ domain containing 9	NM_001040136|Pdzd9|67983|PDZ domain containing 9
mm9_v1_chr15_+_75799550_75799614	0.404339	POU5F1_SOX2{dimer}.p2	AK137962|Zfp707|69020|zinc finger protein 707	NM_001081065|Zfp707|69020|zinc finger protein 707
mm9_v1_chr4_-_129255652_129255823	0.40026	POU5F1_SOX2{dimer}.p2	AK134621|Fam167b|230766|family with sequence similarity 167, member B	BC030183|Fam167b|230766|family with sequence similarity 167, member B	AK143928|Fam167b|230766|family with sequence similarity 167, member B	NM_182783|Fam167b|230766|family with sequence similarity 167, member B
mm9_v1_chr13_-_61107271_61107285	0.389849	POU5F1_SOX2{dimer}.p2	AF136272|Ctsj|26898|cathepsin J	NM_012007|Ctsj|26898|cathepsin J	BC103769|Ctsj|26898|cathepsin J	AK005526|Ctsj|26898|cathepsin J	AK131661|Ctsj|26898|cathepsin J
mm9_v1_chr2_+_102390226_102390305	0.386864	POU5F1_SOX2{dimer}.p2	AK035434|Pamr1|210622|peptidase domain containing associated with muscle regeneration 1	AK088017|Pamr1|210622|peptidase domain containing associated with muscle regeneration 1	AK031254|Pamr1|210622|peptidase domain containing associated with muscle regeneration 1
mm9_v1_chr6_-_30193802_30193802	0.383173	POU5F1_SOX2{dimer}.p2	NM_001169577|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr7_-_111507159_111507159	0.383143	POU5F1_SOX2{dimer}.p2	AK041488|Trim30b|244183|tripartite motif-containing 30B	NM_175648|Trim30b|244183|tripartite motif-containing 30B
mm9_v1_chr1_+_173053280_173053294	0.382178	POU5F1_SOX2{dimer}.p2	BC061017|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chr17_+_23797470_23797489	0.382004	POU5F1_SOX2{dimer}.p2	AK133729|Ccdc64b|212733|coiled-coil domain containing 64B	AK036793|Ccdc64b|212733|coiled-coil domain containing 64B	BC038613|Ccdc64b|212733|coiled-coil domain containing 64B	NM_153784|Ccdc64b|212733|coiled-coil domain containing 64B
mm9_v1_chr17_-_80963173_80963173	0.380754	POU5F1_SOX2{dimer}.p2	AK157995|Cdkl4|381113|cyclin-dependent kinase-like 4	NM_001033443|Cdkl4|381113|cyclin-dependent kinase-like 4
mm9_v1_chr19_-_32182638_32182709	0.379687	POU5F1_SOX2{dimer}.p2	AB037111|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK080951|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK041937|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK047692|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK046540|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK166100|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK034493|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr4_-_14548903_14548926	0.373143	POU5F1_SOX2{dimer}.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr12_+_38607133_38607152	0.372969	POU5F1_SOX2{dimer}.p2	AK032509|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr5_-_26447964_26447964	0.370383	POU5F1_SOX2{dimer}.p2	NM_001134299|Gm10220|434689|predicted gene 10220
mm9_v1_chr19_-_7785715_7785799	0.368548	POU5F1_SOX2{dimer}.p2	AF529221|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	BC021384|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052752|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052603|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	NM_144785|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19
mm9_v1_chrX_+_89735287_89735342	0.365407	POU5F1_SOX2{dimer}.p2	BC100438|Gm5941|546347|predicted gene 5941	NM_001034103|Gm5941|546347|predicted gene 5941	BC051629|Gm5941|546347|predicted gene 5941
mm9_v1_chr14_+_31699648_31699721	0.365185	POU5F1_SOX2{dimer}.p2	NM_001159299|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	NM_018746|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK004862|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK004893|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK050016|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK050270|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AF023919|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC016500|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC021459|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC092258|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC094457|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4
mm9_v1_chr9_+_40590943_40591093	0.364781	POU5F1_SOX2{dimer}.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chrX_+_29483950_29484010	0.360953	POU5F1_SOX2{dimer}.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chr19_-_28057437_28057437	0.357433	POU5F1_SOX2{dimer}.p2	NM_001166414|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)
mm9_v1_chr5_+_98758322_98758388	0.357161	POU5F1_SOX2{dimer}.p2	BC049770|1700007G11Rik|75784|RIKEN cDNA 1700007G11 gene	NM_001024614|1700007G11Rik|75784|RIKEN cDNA 1700007G11 gene	AK005711|1700007G11Rik|75784|RIKEN cDNA 1700007G11 gene
mm9_v1_chr1_-_167932735_167932770	0.354525	POU5F1_SOX2{dimer}.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chrX_-_28258880_28258940	0.354454	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_27251094_27251154	0.354454	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chr3_-_137794277_137794364	0.353699	POU5F1_SOX2{dimer}.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chrX_+_32944181_32944241	0.351258	POU5F1_SOX2{dimer}.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chrX_+_32607378_32607438	0.351258	POU5F1_SOX2{dimer}.p2	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836	X72697|Gm10486|100039550|predicted gene 10486	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147
mm9_v1_chr7_+_126761358_126761361	0.350673	POU5F1_SOX2{dimer}.p2	BC022149|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1
mm9_v1_chrX_-_27912080_27912140	0.350307	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_26822007_26822067	0.350307	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001099325|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chr6_+_83958578_83958628	0.350127	POU5F1_SOX2{dimer}.p2	NM_001077694|Dysf|26903|dysferlin	EF041824|Dysf|26903|dysferlin
mm9_v1_chr3_-_92730151_92730169	0.349581	POU5F1_SOX2{dimer}.p2	BC100538|Lce3a|545548|late cornified envelope 3A	NM_001039594|Lce3a|545548|late cornified envelope 3A
mm9_v1_chr10_+_40657980_40658124	0.346439	POU5F1_SOX2{dimer}.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr5_+_3657003_3657179	0.337828	POU5F1_SOX2{dimer}.p2	AK015666|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	NM_029141|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	NM_029154|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	BC115681|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	AK019559|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene	AK015761|4930511M11Rik|75010|RIKEN cDNA 4930511M11 gene
mm9_v1_chr16_-_21995441_21995614	0.335153	POU5F1_SOX2{dimer}.p2	AY093499|Liph|239759|lipase, member H	AK048150|Liph|239759|lipase, member H	NM_153404|Liph|239759|lipase, member H	BC037489|Liph|239759|lipase, member H	AK161067|Liph|239759|lipase, member H	AK035498|Liph|239759|lipase, member H	AK134352|Liph|239759|lipase, member H	AK136503|Liph|239759|lipase, member H	AK162492|Liph|239759|lipase, member H	AK137278|Liph|239759|lipase, member H	NM_001083894|Liph|239759|lipase, member H
mm9_v1_chr15_+_74786009_74786124	0.333373	POU5F1_SOX2{dimer}.p2	AK014207|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC005684|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC040691|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC019113|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC002116|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC003926|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC037143|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC053523|Ly6e|17069|lymphocyte antigen 6 complex, locus E	BC080711|Ly6e|17069|lymphocyte antigen 6 complex, locus E	AK165303|Ly6e|17069|lymphocyte antigen 6 complex, locus E	U09192|Ly6e|17069|lymphocyte antigen 6 complex, locus E
mm9_v1_chr8_-_94879643_94879671	0.333239	POU5F1_SOX2{dimer}.p2	AK181465|4933436C20Rik|71296|RIKEN cDNA 4933436C20 gene
mm9_v1_chr14_-_66211842_66211926	0.332683	POU5F1_SOX2{dimer}.p2	NM_028811|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK012072|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK150058|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	BC057453|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK088457|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)
mm9_v1_chr10_+_74674793_74674887	0.327912	POU5F1_SOX2{dimer}.p2	AK035500|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AY884297|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_153406|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK052716|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK172502|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like
mm9_v1_chr2_+_85815369_85815369	0.326741	POU5F1_SOX2{dimer}.p2	BC150841|Olfr1029|258154|olfactory receptor 1029	NM_001011852|Olfr1029|258154|olfactory receptor 1029
mm9_v1_chrX_-_29947647_29947707	0.326322	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chrX_-_27597810_27597870	0.326322	POU5F1_SOX2{dimer}.p2	BC099540|Gm10486|100039550|predicted gene 10486	NM_001099919|Gm10147|100039324|predicted gene 10147	BC099541|Gm10488|100042109|predicted gene 10488	NM_001109969|Gm10058|100039240|predicted gene 10058	BC087930|Gm10486|100039550|predicted gene 10486	NM_001099347|Gm10230|100042175|predicted gene 10230	NM_001100610|Gm14632|100042144|predicted gene 14632	NM_001110250|Gm14819|100039585|predicted gene 14819	X72697|Gm10486|100039550|predicted gene 10486	BC061169|Gm4836|22526|predicted gene 4836	NM_001100609|Gm10487|100039467|predicted gene 10487	NM_001102678|Gm10096|100039377|predicted gene 10096	NM_001109970|Gm10486|100039550|predicted gene 10486	NM_009529|Gm4836|22526|predicted gene 4836
mm9_v1_chr18_-_80443840_80443840	0.324741	POU5F1_SOX2{dimer}.p2	AK141935|Hsbp1l1|66255|heat shock factor binding protein 1-like 1	NM_001136181|Hsbp1l1|66255|heat shock factor binding protein 1-like 1
mm9_v1_chr5_-_87766195_87766202	0.32273	POU5F1_SOX2{dimer}.p2	BC025795|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3	AK008601|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3
mm9_v1_chr11_-_62190182_62190262	0.322186	POU5F1_SOX2{dimer}.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr16_-_17561311_17561339	0.321727	POU5F1_SOX2{dimer}.p2	AK143245|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK039092|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115678|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115679|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK132588|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK161226|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_001145435|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_029053|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene
mm9_v1_chr4_+_138523026_138523034	0.321679	POU5F1_SOX2{dimer}.p2	NM_025786|Rnf186|66825|ring finger protein 186	AK078919|Rnf186|66825|ring finger protein 186
mm9_v1_chr16_+_89206105_89206105	0.320783	POU5F1_SOX2{dimer}.p2	AK004483|Krtap20-2|622935|keratin associated protein 20-2	NM_001163615|Krtap20-2|622935|keratin associated protein 20-2
mm9_v1_chr9_-_106784619_106784649	0.318458	POU5F1_SOX2{dimer}.p2	AK162618|Rbm15b|109095|RNA binding motif protein 15B
mm9_v1_chr13_+_49678115_49678143	0.317242	POU5F1_SOX2{dimer}.p2	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr7_+_126761293_126761347	0.314807	POU5F1_SOX2{dimer}.p2	AK149586|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	AK149550|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	BC016414|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	AB059428|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	NM_054094|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1
mm9_v1_chr8_-_95753501_95753517	0.312775	POU5F1_SOX2{dimer}.p2	AK144549|Ces1e|13897|carboxylesterase 1E	NM_133660|Ces1e|13897|carboxylesterase 1E
mm9_v1_chr8_-_42300477_42300498	0.302841	POU5F1_SOX2{dimer}.p2	BC021946|Fgl1|234199|fibrinogen-like protein 1	BC029734|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr3_-_96618414_96618443	0.302038	POU5F1_SOX2{dimer}.p2	AF060982|Cd160|54215|CD160 antigen	BC021596|Cd160|54215|CD160 antigen	AK042093|Cd160|54215|CD160 antigen	NM_018767|Cd160|54215|CD160 antigen
mm9_v1_chr5_-_111239115_111239150	0.301919	POU5F1_SOX2{dimer}.p2	AK154939|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)
mm9_v1_chr19_+_8911956_8912218	0.299946	POU5F1_SOX2{dimer}.p2	NM_001136064|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK052341|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	BC061689|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr6_-_119146426_119146446	0.296727	POU5F1_SOX2{dimer}.p2	AK052162|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_009781|Cacna1c|12288|calcium channel, voltage-dependent, L type, alpha 1C subunit
mm9_v1_chr4_+_57907600_57907648	0.296424	POU5F1_SOX2{dimer}.p2	BC034188|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr3_+_157204031_157204041	0.2947	POU5F1_SOX2{dimer}.p2	BC051187|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr17_-_33855557_33855658	0.292893	POU5F1_SOX2{dimer}.p2	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr18_+_44264117_44264290	0.292673	POU5F1_SOX2{dimer}.p2	DQ437332|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK136616|Spink12|78242|serine peptidase inhibitor, Kazal type 11	NM_030061|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK020352|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145914|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145916|Spink12|78242|serine peptidase inhibitor, Kazal type 11
mm9_v1_chr4_-_34754469_34754554	0.291419	POU5F1_SOX2{dimer}.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chrX_-_108651553_108651553	0.291198	POU5F1_SOX2{dimer}.p2	NM_025949|Rps6ka6|67071|ribosomal protein S6 kinase polypeptide 6
mm9_v1_chr6_+_128995918_128995965	0.291022	POU5F1_SOX2{dimer}.p2	AK041601|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	NM_153094|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	AK154278|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	BC107177|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	BC107178|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	BC127141|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	BC127142|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	AK170023|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	AY029597|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F	DQ237931|Klrb1f|232408|killer cell lectin-like receptor subfamily B member 1F
mm9_v1_chr19_-_34240392_34240542	0.290713	POU5F1_SOX2{dimer}.p2	BC003460|Ankrd22|52024|ankyrin repeat domain 22	AK017408|Ankrd22|52024|ankyrin repeat domain 22	AK037242|Ankrd22|52024|ankyrin repeat domain 22	AK017360|Ankrd22|52024|ankyrin repeat domain 22	NM_024204|Ankrd22|52024|ankyrin repeat domain 22	AK012869|Ankrd22|52024|ankyrin repeat domain 22
mm9_v1_chr18_+_23573939_23573956	0.287777	POU5F1_SOX2{dimer}.p2	BC040364|Dtna|13527|dystrobrevin alpha
mm9_v1_chr16_+_25802001_25802145	0.284904	POU5F1_SOX2{dimer}.p2	AK048623|Trp63|22061|transformation related protein 63	BC092537|Trp63|22061|transformation related protein 63	NM_001127262|Trp63|22061|transformation related protein 63	NM_001127263|Trp63|22061|transformation related protein 63	NM_001127264|Trp63|22061|transformation related protein 63	NM_001127265|Trp63|22061|transformation related protein 63	NM_011641|Trp63|22061|transformation related protein 63	AK137253|Trp63|22061|transformation related protein 63	BC090649|Trp63|22061|transformation related protein 63	AB010152|Trp63|22061|transformation related protein 63	AF075437|Trp63|22061|transformation related protein 63	AF075438|Trp63|22061|transformation related protein 63	AF075439|Trp63|22061|transformation related protein 63
mm9_v1_chr6_-_82889694_82889743	0.283992	POU5F1_SOX2{dimer}.p2	AB021291|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC057048|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC090625|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK047067|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC094567|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK035993|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK143196|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_001113481|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_011350|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr9_+_92502908_92503003	0.283206	POU5F1_SOX2{dimer}.p2	AK218100|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr10_-_7512590_7512629	0.282206	POU5F1_SOX2{dimer}.p2	AK045988|6530403G13Rik|76227|RIKEN cDNA 6530403G13 gene	AK018318|6530403G13Rik|76227|RIKEN cDNA 6530403G13 gene	AK084809|6530403G13Rik|76227|RIKEN cDNA 6530403G13 gene
mm9_v1_chr7_-_27951724_27951820	0.280693	POU5F1_SOX2{dimer}.p2	AF453879|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC023299|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC086764|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK075582|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK159206|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK167477|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152223|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152056|Egln2|112406|EGL nine homolog 2 (C. elegans)	AJ310547|Egln2|112406|EGL nine homolog 2 (C. elegans)	NM_053208|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr11_-_31724523_31724546	0.278803	POU5F1_SOX2{dimer}.p2	AK085420|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene	AK158233|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene	AK158188|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene
mm9_v1_chr13_+_27149438_27149473	0.278355	POU5F1_SOX2{dimer}.p2	NM_001163530|Prl|19109|prolactin	NM_011164|Prl|19109|prolactin	AK017547|Prl|19109|prolactin	AK161619|Prl|19109|prolactin	AK077493|Prl|19109|prolactin	AK017520|Prl|19109|prolactin	X04418|Prl|19109|prolactin	AK017521|Prl|19109|prolactin	AK017579|Prl|19109|prolactin	AK017584|Prl|19109|prolactin	AK133645|Prl|19109|prolactin	AK133736|Prl|19109|prolactin	AK133752|Prl|19109|prolactin	AK161553|Prl|19109|prolactin	AK161557|Prl|19109|prolactin	AK161565|Prl|19109|prolactin	AK161594|Prl|19109|prolactin	BC061141|Prl|19109|prolactin	X02892|Prl|19109|prolactin	AK017562|Prl|19109|prolactin
mm9_v1_chr5_-_27827931_27827977	0.277847	POU5F1_SOX2{dimer}.p2	BC119075|Speer4b|73526|spermatogenesis associated glutamate (E)-rich protein 4b	NM_028561|Speer4b|73526|spermatogenesis associated glutamate (E)-rich protein 4b	AK006975|Speer4b|73526|spermatogenesis associated glutamate (E)-rich protein 4b
mm9_v1_chr14_+_80400057_80400108	0.273708	POU5F1_SOX2{dimer}.p2	BC141127|Olfm4|380924|olfactomedin 4	BC145436|Olfm4|380924|olfactomedin 4	AK133536|Olfm4|380924|olfactomedin 4	NM_001030294|Olfm4|380924|olfactomedin 4
mm9_v1_chr18_+_37644674_37644812	0.271992	POU5F1_SOX2{dimer}.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chrY_-_1426317_1426356	0.271191	POU5F1_SOX2{dimer}.p2	M24401|Zfy2|22768|zinc finger protein 2, Y linked	AK133222|Zfy2|22768|zinc finger protein 2, Y linked	NM_009571|Zfy2|22768|zinc finger protein 2, Y linked
mm9_v1_chrX_+_135751704_135751704	0.271137	POU5F1_SOX2{dimer}.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr17_-_30729995_30730086	0.268664	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr4_+_130225132_130225155	0.266705	POU5F1_SOX2{dimer}.p2	AK154059|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr14_-_51766415_51766443	0.264072	POU5F1_SOX2{dimer}.p2	M27814|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	BC030036|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	AK075775|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	NM_011271|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)
mm9_v1_chr2_-_73705966_73706060	0.263683	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr6_+_121596815_121596927	0.263407	POU5F1_SOX2{dimer}.p2	BC023844|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr11_+_83522505_83522613	0.260761	POU5F1_SOX2{dimer}.p2	NM_007969|Expi|14038|extracellular proteinase inhibitor	BC010986|Expi|14038|extracellular proteinase inhibitor	X93037|Expi|14038|extracellular proteinase inhibitor	AK145032|Expi|14038|extracellular proteinase inhibitor
mm9_v1_chr2_+_128604653_128604725	0.260055	POU5F1_SOX2{dimer}.p2	AK029009|Mertk|17289|c-mer proto-oncogene tyrosine kinase
mm9_v1_chr8_-_23235509_23235538	0.259781	POU5F1_SOX2{dimer}.p2	AK165108|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	BC053516|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK032672|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	NM_177898|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK054168|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5
mm9_v1_chr17_-_24211852_24211965	0.255615	POU5F1_SOX2{dimer}.p2	AK079579|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr6_+_122463663_122463700	0.25483	POU5F1_SOX2{dimer}.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr16_-_36562219_36562219	0.254311	POU5F1_SOX2{dimer}.p2	AF110178|Casr|12374|calcium-sensing receptor	AF110179|Casr|12374|calcium-sensing receptor	NM_013803|Casr|12374|calcium-sensing receptor
mm9_v1_chr5_-_87766219_87766221	0.2527	POU5F1_SOX2{dimer}.p2	AK050327|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3	NM_028094|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3
mm9_v1_chr4_+_115845976_115845999	0.252156	POU5F1_SOX2{dimer}.p2	AK006685|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	NM_001099295|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	AK018884|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene
mm9_v1_chr17_+_80706746_80706746	0.251635	POU5F1_SOX2{dimer}.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr6_-_129863199_129863241	0.246632	POU5F1_SOX2{dimer}.p2	BC120550|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	BC137708|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF247643|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	NM_008463|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	U10091|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5
mm9_v1_chr2_-_57905140_57905276	0.245512	POU5F1_SOX2{dimer}.p2	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr11_+_102977638_102977680	0.242486	POU5F1_SOX2{dimer}.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr12_+_120681882_120681882	0.23981	POU5F1_SOX2{dimer}.p2	NM_001163136|Macc1|238455|metastasis associated in colon cancer 1
mm9_v1_chr3_+_98026078_98026095	0.239726	POU5F1_SOX2{dimer}.p2	AK008049|Reg4|67709|regenerating islet-derived family, member 4	AK008438|Reg4|67709|regenerating islet-derived family, member 4	AK162316|Reg4|67709|regenerating islet-derived family, member 4	NM_026328|Reg4|67709|regenerating islet-derived family, member 4	AK160329|Reg4|67709|regenerating islet-derived family, member 4	BC019465|Reg4|67709|regenerating islet-derived family, member 4
mm9_v1_chr2_-_58177217_58177217	0.236811	POU5F1_SOX2{dimer}.p2	AK049089|Acvr1c|269275|activin A receptor, type IC	NM_001033369|Acvr1c|269275|activin A receptor, type IC
mm9_v1_chr12_-_53129049_53129152	0.234685	POU5F1_SOX2{dimer}.p2	AF045766|Gpr33|14762|G protein-coupled receptor 33	BC064084|Gpr33|14762|G protein-coupled receptor 33	NM_008159|Gpr33|14762|G protein-coupled receptor 33	GQ981323|Gpr33|14762|G protein-coupled receptor 33	GQ981327|Gpr33|14762|G protein-coupled receptor 33
mm9_v1_chr12_-_52849709_52849723	0.234163	POU5F1_SOX2{dimer}.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr6_+_73198498_73198722	0.218987	POU5F1_SOX2{dimer}.p2	NM_019879|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK088888|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK005080|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK087390|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK002754|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AF144101|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK139288|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	BC011087|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK184184|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr2_+_24008680_24008706	0.217308	POU5F1_SOX2{dimer}.p2	AK009787|Il1f8|69677|interleukin 1 family, member 8	BC119517|Il1f8|69677|interleukin 1 family, member 8	NM_027163|Il1f8|69677|interleukin 1 family, member 8	AY071842|Il1f8|69677|interleukin 1 family, member 8
mm9_v1_chr3_-_148617598_148617598	0.216993	POU5F1_SOX2{dimer}.p2	NM_001081298|Lphn2|99633|latrophilin 2
mm9_v1_chr3_-_69663781_69663817	0.21201	POU5F1_SOX2{dimer}.p2	AK009973|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	BC022628|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AF365876|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK004017|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK010117|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_001164210|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_133675|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene
mm9_v1_chr10_+_3323355_3323355	0.211849	POU5F1_SOX2{dimer}.p2	NM_001033391|Ipcef1|320495|interaction protein for cytohesin exchange factors 1
mm9_v1_chr17_-_6943173_6943193	0.209376	POU5F1_SOX2{dimer}.p2	AK207973|Ezr|22350|ezrin	AK207113|Ezr|22350|ezrin
mm9_v1_chr5_-_122497833_122497833	0.207643	POU5F1_SOX2{dimer}.p2	BC065113|Cux2|13048|cut-like homeobox 2	NM_007804|Cux2|13048|cut-like homeobox 2
mm9_v1_chr19_-_40148300_40148333	0.20593	POU5F1_SOX2{dimer}.p2	NM_206537|Cyp2c54|404195|cytochrome P450, family 2, subfamily c, polypeptide 54
mm9_v1_chr17_-_59130757_59130797	0.204668	POU5F1_SOX2{dimer}.p2	BC034642|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene	BC033350|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene	NM_027001|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene
mm9_v1_chr13_-_111070225_111070335	0.203529	POU5F1_SOX2{dimer}.p2	AB232589|Rab3c|67295|RAB3C, member RAS oncogene family	AF312037|Rab3c|67295|RAB3C, member RAS oncogene family	AJ310532|Rab3c|67295|RAB3C, member RAS oncogene family	BC114335|Rab3c|67295|RAB3C, member RAS oncogene family	AY026947|Rab3c|67295|RAB3C, member RAS oncogene family	AK079574|Rab3c|67295|RAB3C, member RAS oncogene family	AK148904|Rab3c|67295|RAB3C, member RAS oncogene family	AK014132|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr18_-_15562126_15562266	0.202471	POU5F1_SOX2{dimer}.p2	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr19_-_32177613_32177629	0.202142	POU5F1_SOX2{dimer}.p2	BC137898|Asah2|54447|N-acylsphingosine amidohydrolase 2	BC145016|Asah2|54447|N-acylsphingosine amidohydrolase 2	AB037181|Asah2|54447|N-acylsphingosine amidohydrolase 2	NM_018830|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr6_+_116287992_116288071	0.201356	POU5F1_SOX2{dimer}.p2	AK154976|March8|71779|membrane-associated ring finger (C3HC4) 8	BC050908|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr12_-_52847096_52847142	0.197872	POU5F1_SOX2{dimer}.p2	BC010205|Hectd1|207304|HECT domain containing 1
mm9_v1_chr13_-_56649898_56649912	0.194166	POU5F1_SOX2{dimer}.p2	NM_010702|Lect2|16841|leukocyte cell-derived chemotaxin 2
mm9_v1_chr8_+_97835414_97835512	0.194017	POU5F1_SOX2{dimer}.p2	NM_199455|Tepp|73407|testis, prostate and placenta expressed	BC104382|Tepp|73407|testis, prostate and placenta expressed	BC104383|Tepp|73407|testis, prostate and placenta expressed	BC087870|Tepp|73407|testis, prostate and placenta expressed	AK006802|Tepp|73407|testis, prostate and placenta expressed	NM_028532|Tepp|73407|testis, prostate and placenta expressed
mm9_v1_chr12_-_115170216_115170645	0.192321	POU5F1_SOX2{dimer}.p2	BC092269|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr5_+_135526788_135526925	0.189561	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr13_-_67500685_67500702	0.189272	POU5F1_SOX2{dimer}.p2	AK083314|Zfp429|72807|zinc finger protein 429	BC046484|Zfp429|72807|zinc finger protein 429	NM_001080941|Zfp429|72807|zinc finger protein 429
mm9_v1_chr3_+_106487904_106487904	0.189059	POU5F1_SOX2{dimer}.p2	NM_001039478|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr3_-_40706422_40706464	0.188933	POU5F1_SOX2{dimer}.p2	AK077003|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene	BC117739|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene	AK006596|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene	NM_028494|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene
mm9_v1_chr12_-_104695432_104695432	0.187288	POU5F1_SOX2{dimer}.p2	BC021795|Ifi27l2b|217845|interferon, alpha-inducible protein 27 like 2B	NM_145449|Ifi27l2b|217845|interferon, alpha-inducible protein 27 like 2B
mm9_v1_chr13_-_76236014_76236047	0.184762	POU5F1_SOX2{dimer}.p2	AK035464|Arsk|77041|arylsulfatase K
mm9_v1_chr3_-_38349112_38349206	0.183163	POU5F1_SOX2{dimer}.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr3_+_28596824_28596914	0.18221	POU5F1_SOX2{dimer}.p2	AK005068|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	NM_031197|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	AK165430|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	X15684|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	BC034675|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2
mm9_v1_chr10_-_12897796_12897828	0.182136	POU5F1_SOX2{dimer}.p2	AK015837|Fam164b|75122|family with sequence similarity 164, member B	BC137685|Fam164b|75122|family with sequence similarity 164, member B	BC144830|Fam164b|75122|family with sequence similarity 164, member B	NM_029172|Fam164b|75122|family with sequence similarity 164, member B
mm9_v1_chr4_+_57907032_57907040	0.181389	POU5F1_SOX2{dimer}.p2	AK086796|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr16_-_95680888_95680987	0.180182	POU5F1_SOX2{dimer}.p2	AK142379|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chrX_-_76916773_76916773	0.180148	POU5F1_SOX2{dimer}.p2	AK010362|Mageb16|71967|melanoma antigen family B, 16	NM_028025|Mageb16|71967|melanoma antigen family B, 16
mm9_v1_chr3_+_107895985_107896200	0.180086	POU5F1_SOX2{dimer}.p2	BC016272|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	NM_008141|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131941|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131943|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC085102|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	L10666|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	AK009388|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2
mm9_v1_chr9_-_21940154_21940189	0.179405	POU5F1_SOX2{dimer}.p2	AK010865|Acp5|11433|acid phosphatase 5, tartrate resistant	AK011915|Acp5|11433|acid phosphatase 5, tartrate resistant	NM_001102405|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr12_+_105350933_105350933	0.178443	POU5F1_SOX2{dimer}.p2	AK016702|Serpina3a|74069|serine (or cysteine) peptidase inhibitor, clade A, member 3A	BC063325|Serpina3a|74069|serine (or cysteine) peptidase inhibitor, clade A, member 3A	NM_001167705|Serpina3a|74069|serine (or cysteine) peptidase inhibitor, clade A, member 3A
mm9_v1_chr1_-_65097587_65097736	0.177269	POU5F1_SOX2{dimer}.p2	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr11_-_109689335_109689359	0.177115	POU5F1_SOX2{dimer}.p2	BC048675|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	BC099559|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	AK005888|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	AK160153|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	AK132924|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	NM_001162428|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	NM_027038|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene
mm9_v1_chrX_-_100103981_100104025	0.174177	POU5F1_SOX2{dimer}.p2	DQ316772|Dmrtc1a|70887|DMRT-like family C1a	BC147175|Dmrtc1a|70887|DMRT-like family C1a	BC147176|Dmrtc1a|70887|DMRT-like family C1a	AK014934|Dmrtc1a|70887|DMRT-like family C1a	NM_027591|Dmrtc1a|70887|DMRT-like family C1a
mm9_v1_chr2_-_144157430_144157498	0.171388	POU5F1_SOX2{dimer}.p2	AB101296|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr5_-_77640458_77640477	0.170255	POU5F1_SOX2{dimer}.p2	BC087876|Spink2|69982|serine peptidase inhibitor, Kazal type 2	BC048619|Spink2|69982|serine peptidase inhibitor, Kazal type 2	AK005709|Spink2|69982|serine peptidase inhibitor, Kazal type 2	NM_183284|Spink2|69982|serine peptidase inhibitor, Kazal type 2
mm9_v1_chr4_-_14723198_14723206	0.170031	POU5F1_SOX2{dimer}.p2	AK161371|Lrrc69|73314|leucine rich repeat containing 69	NM_028499|Lrrc69|73314|leucine rich repeat containing 69	AK006601|Lrrc69|73314|leucine rich repeat containing 69
mm9_v1_chr6_+_87040212_87040221	0.168485	POU5F1_SOX2{dimer}.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr7_-_25372613_25372684	0.166789	POU5F1_SOX2{dimer}.p2	AK138180|Zfp575|101544|zinc finger protein 575	BC150867|Zfp575|101544|zinc finger protein 575	BC150873|Zfp575|101544|zinc finger protein 575	AK159025|Zfp575|101544|zinc finger protein 575	NM_001033205|Zfp575|101544|zinc finger protein 575
mm9_v1_chr17_-_40379205_40379215	0.166398	POU5F1_SOX2{dimer}.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr16_-_13984713_13984713	0.166044	POU5F1_SOX2{dimer}.p2	AK017110|Ifitm7|74482|interferon induced transmembrane protein 7	NM_028968|Ifitm7|74482|interferon induced transmembrane protein 7
mm9_v1_chr11_-_97637190_97637231	0.165213	POU5F1_SOX2{dimer}.p2	AK005619|1700001P01Rik|72215|RIKEN cDNA 1700001P01 gene	BC048607|1700001P01Rik|72215|RIKEN cDNA 1700001P01 gene	NM_028156|1700001P01Rik|72215|RIKEN cDNA 1700001P01 gene
mm9_v1_chr4_-_49519333_49519379	0.165154	POU5F1_SOX2{dimer}.p2	U95215|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	BC012683|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	AK017923|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr6_-_69599335_69599382	0.165119	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr1_+_167718811_167718898	0.163543	POU5F1_SOX2{dimer}.p2	AK138774|Cd247|12503|CD247 antigen	J04967|Cd247|12503|CD247 antigen	NM_001113391|Cd247|12503|CD247 antigen	NM_001113392|Cd247|12503|CD247 antigen	NM_001113393|Cd247|12503|CD247 antigen	NM_001113394|Cd247|12503|CD247 antigen	NM_031162|Cd247|12503|CD247 antigen	AK017904|Cd247|12503|CD247 antigen	AK088087|Cd247|12503|CD247 antigen	L03353|Cd247|12503|CD247 antigen	S51932|Cd247|12503|CD247 antigen	U56258|Cd247|12503|CD247 antigen	X84237|Cd247|12503|CD247 antigen	BC052824|Cd247|12503|CD247 antigen
mm9_v1_chr1_+_169528492_169528646	0.15898	POU5F1_SOX2{dimer}.p2	NM_009107|Rxrg|20183|retinoid X receptor gamma	BC058401|Rxrg|20183|retinoid X receptor gamma	S62948|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr7_-_26506741_26506878	0.156021	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr9_+_105299234_105299250	0.155184	POU5F1_SOX2{dimer}.p2	AK003146|Aste1|66595|asteroid homolog 1 (Drosophila)
mm9_v1_chr6_-_134837738_134837876	0.153893	POU5F1_SOX2{dimer}.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr7_+_109850836_109850868	0.152905	POU5F1_SOX2{dimer}.p2	AK141545|Olfr558|259097|olfactory receptor 558	NM_147093|Olfr558|259097|olfactory receptor 558
mm9_v1_chr2_+_139319874_139319888	0.152129	POU5F1_SOX2{dimer}.p2	AK048374|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	BC094496|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3
mm9_v1_chr5_+_121311429_121311430	0.152043	POU5F1_SOX2{dimer}.p2	AK135899|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	AB067530|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	NM_001159934|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	NM_145228|Oas1h|246729|2'-5' oligoadenylate synthetase 1H
mm9_v1_chr19_+_40066913_40066929	0.150703	POU5F1_SOX2{dimer}.p2	AK005017|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	NM_010001|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	BC057912|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	AF047542|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37
mm9_v1_chr14_-_111154292_111154370	0.149341	POU5F1_SOX2{dimer}.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr12_-_89420210_89420337	0.148712	POU5F1_SOX2{dimer}.p2	BC094894|Gm10436|100039315|predicted gene 10436	AK139576|Gm10436|100039315|predicted gene 10436	NM_001105254|Gm10436|100039315|predicted gene 10436
mm9_v1_chr5_+_136455974_136455989	0.147305	POU5F1_SOX2{dimer}.p2	BC100745|Zp3|22788|zona pellucida glycoprotein 3	BC103583|Zp3|22788|zona pellucida glycoprotein 3	BC103584|Zp3|22788|zona pellucida glycoprotein 3	BC103585|Zp3|22788|zona pellucida glycoprotein 3	M20026|Zp3|22788|zona pellucida glycoprotein 3	NM_011776|Zp3|22788|zona pellucida glycoprotein 3	AK131934|Zp3|22788|zona pellucida glycoprotein 3	BC099465|Zp3|22788|zona pellucida glycoprotein 3
mm9_v1_chr18_+_37854011_37854154	0.145952	POU5F1_SOX2{dimer}.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr12_+_73542852_73542935	0.144981	POU5F1_SOX2{dimer}.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr11_+_81928683_81928693	0.144801	POU5F1_SOX2{dimer}.p2	AK007942|Ccl8|20307|chemokine (C-C motif) ligand 8	NM_021443|Ccl8|20307|chemokine (C-C motif) ligand 8	AB023418|Ccl8|20307|chemokine (C-C motif) ligand 8	BC117101|Ccl8|20307|chemokine (C-C motif) ligand 8	BC117103|Ccl8|20307|chemokine (C-C motif) ligand 8
mm9_v1_chr18_+_44429780_44429922	0.143271	POU5F1_SOX2{dimer}.p2	AK030279|Npy6r|18169|neuropeptide Y receptor Y6	NM_010935|Npy6r|18169|neuropeptide Y receptor Y6	BC103620|Npy6r|18169|neuropeptide Y receptor Y6	BC103621|Npy6r|18169|neuropeptide Y receptor Y6	BC103622|Npy6r|18169|neuropeptide Y receptor Y6	BC103667|Npy6r|18169|neuropeptide Y receptor Y6
mm9_v1_chr2_-_3339919_3339919	0.141	POU5F1_SOX2{dimer}.p2	BC049538|Meig1|104362|meiosis expressed gene 1	NM_008579|Meig1|104362|meiosis expressed gene 1
mm9_v1_chr2_+_79547936_79548278	0.140398	POU5F1_SOX2{dimer}.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr10_+_100055019_100055050	0.140364	POU5F1_SOX2{dimer}.p2	NM_001081246|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK014917|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK006074|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene
mm9_v1_chr9_-_37538645_37538688	0.137983	POU5F1_SOX2{dimer}.p2	BC138117|Olfr151|406176|olfactory receptor 151	BC138118|Olfr151|406176|olfactory receptor 151	NM_207664|Olfr151|406176|olfactory receptor 151	AY245537|Olfr151|406176|olfactory receptor 151
mm9_v1_chr7_+_111054855_111054855	0.137784	POU5F1_SOX2{dimer}.p2	BC137766|Olfr65|18365|olfactory receptor 65	NM_013616|Olfr65|18365|olfactory receptor 65
mm9_v1_chr8_+_87223501_87223638	0.137212	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr16_+_17045125_17045167	0.136554	POU5F1_SOX2{dimer}.p2	AK163692|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr11_-_106077657_106077682	0.136551	POU5F1_SOX2{dimer}.p2	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr13_-_26861883_26862033	0.133123	POU5F1_SOX2{dimer}.p2	AF180109|Hdgfl1|15192|hepatoma derived growth factor-like 1	BC115593|Hdgfl1|15192|hepatoma derived growth factor-like 1	BC115594|Hdgfl1|15192|hepatoma derived growth factor-like 1	BC108388|Hdgfl1|15192|hepatoma derived growth factor-like 1	D63663|Hdgfl1|15192|hepatoma derived growth factor-like 1	AK133357|Hdgfl1|15192|hepatoma derived growth factor-like 1	NM_008232|Hdgfl1|15192|hepatoma derived growth factor-like 1
mm9_v1_chr5_+_8422837_8422987	0.124694	POU5F1_SOX2{dimer}.p2	AK044260|Slc25a40|319653|solute carrier family 25, member 40	AK045863|Slc25a40|319653|solute carrier family 25, member 40	NM_178766|Slc25a40|319653|solute carrier family 25, member 40	AK044862|Slc25a40|319653|solute carrier family 25, member 40	AK136770|Slc25a40|319653|solute carrier family 25, member 40	AK163037|Slc25a40|319653|solute carrier family 25, member 40	AK088444|Slc25a40|319653|solute carrier family 25, member 40	AK079538|Slc25a40|319653|solute carrier family 25, member 40	AK084797|Slc25a40|319653|solute carrier family 25, member 40	BC083103|Slc25a40|319653|solute carrier family 25, member 40
mm9_v1_chr17_+_21625972_21626045	0.122577	POU5F1_SOX2{dimer}.p2	BC020362|Zfp53|24132|zinc finger protein 53
mm9_v1_chr19_+_11592938_11593140	0.12218	POU5F1_SOX2{dimer}.p2	AF237909|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	NM_027209|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK172345|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	BC027425|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK075671|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK007613|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B
mm9_v1_chr18_+_35750406_35750586	0.121005	POU5F1_SOX2{dimer}.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr15_+_16707855_16707855	0.11984	POU5F1_SOX2{dimer}.p2	NM_009869|Cdh9|12565|cadherin 9
mm9_v1_chr5_-_136611846_136611947	0.118559	POU5F1_SOX2{dimer}.p2	AK004717|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK154352|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK051910|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK167020|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK172708|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK153976|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	BC048397|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK042370|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK084948|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	NM_027891|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1
mm9_v1_chr5_+_150242274_150242293	0.117448	POU5F1_SOX2{dimer}.p2	AK087319|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC120819|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144997|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144998|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144999|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	NM_029464|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK161244|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK016369|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene
mm9_v1_chr3_+_95330700_95330810	0.115569	POU5F1_SOX2{dimer}.p2	AK028366|Ctss|13040|cathepsin S	NM_021281|Ctss|13040|cathepsin S	AJ002386|Ctss|13040|cathepsin S	AK152191|Ctss|13040|cathepsin S	AF038546|Ctss|13040|cathepsin S	AK150274|Ctss|13040|cathepsin S	BC011104|Ctss|13040|cathepsin S	BC002125|Ctss|13040|cathepsin S
mm9_v1_chr15_-_53734033_53734098	0.115561	POU5F1_SOX2{dimer}.p2	AK032588|Samd12|320679|sterile alpha motif domain containing 12	AK080536|Samd12|320679|sterile alpha motif domain containing 12
mm9_v1_chr3_+_95965892_95965939	0.113562	POU5F1_SOX2{dimer}.p2	NM_181409|Mtmr11|194126|myotubularin related protein 11	AK132375|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr16_-_29378636_29378817	0.112193	POU5F1_SOX2{dimer}.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr16_-_31314534_31314685	0.110578	POU5F1_SOX2{dimer}.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr17_+_21625914_21625965	0.108239	POU5F1_SOX2{dimer}.p2	BC023798|Zfp53|24132|zinc finger protein 53	BC046328|Zfp53|24132|zinc finger protein 53	AK148857|Zfp53|24132|zinc finger protein 53	NM_013843|Zfp53|24132|zinc finger protein 53	AK147827|Zfp53|24132|zinc finger protein 53	AK030965|Zfp53|24132|zinc finger protein 53
mm9_v1_chr3_-_115832605_115832605	0.10355	POU5F1_SOX2{dimer}.p2	BC029823|Vcam1|22329|vascular cell adhesion molecule 1	NM_011693|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr2_+_146047656_146047846	0.100539	POU5F1_SOX2{dimer}.p2	BC051240|Insm1|53626|insulinoma-associated 1	NM_016889|Insm1|53626|insulinoma-associated 1	AF044669|Insm1|53626|insulinoma-associated 1	BC082809|Insm1|53626|insulinoma-associated 1
mm9_v1_chr16_+_96457407_96457407	0.0993516	POU5F1_SOX2{dimer}.p2	BC047347|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	BC051669|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_001122993|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr5_-_111239017_111239099	0.098363	POU5F1_SOX2{dimer}.p2	BC059835|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK148317|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK156534|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	BC057121|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	NM_009469|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)
mm9_v1_chr8_-_97637241_97637241	0.0969195	POU5F1_SOX2{dimer}.p2	AK132895|Kifc3|16582|kinesin family member C3	NM_001145832|Kifc3|16582|kinesin family member C3
mm9_v1_chr12_-_42212337_42212337	0.0941697	POU5F1_SOX2{dimer}.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr5_+_3571565_3571715	0.0924671	POU5F1_SOX2{dimer}.p2	BC048606|1700109H08Rik|77036|RIKEN cDNA 1700109H08 gene	AK007150|1700109H08Rik|77036|RIKEN cDNA 1700109H08 gene	BC099581|1700109H08Rik|77036|RIKEN cDNA 1700109H08 gene	NM_029843|1700109H08Rik|77036|RIKEN cDNA 1700109H08 gene
mm9_v1_chr7_+_147433182_147433279	0.0914467	POU5F1_SOX2{dimer}.p2	AK030813|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	AK040624|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_175533|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	BC139294|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	EF624462|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_001128146|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	EF624463|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_001128145|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene
mm9_v1_chr3_-_92261456_92261538	0.0913252	POU5F1_SOX2{dimer}.p2	NM_011478|Sprr3|20766|small proline-rich protein 3	BC125629|Sprr3|20766|small proline-rich protein 3
mm9_v1_chr18_-_32071556_32071556	0.0906029	POU5F1_SOX2{dimer}.p2	NM_026006|Sft2d3|67158|SFT2 domain containing 3
mm9_v1_chr16_-_57292963_57292977	0.0882203	POU5F1_SOX2{dimer}.p2	AK161475|Tmem30c|71027|transmembrane protein 30C	NM_027651|Tmem30c|71027|transmembrane protein 30C	AK016747|Tmem30c|71027|transmembrane protein 30C	AK016597|Tmem30c|71027|transmembrane protein 30C
mm9_v1_chr12_-_32398730_32398790	0.0876646	POU5F1_SOX2{dimer}.p2	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr16_+_11313901_11314030	0.0842791	POU5F1_SOX2{dimer}.p2	AF061505|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	NM_011608|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	AK020247|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	BC027519|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17
mm9_v1_chrX_-_24352289_24352289	0.0834678	POU5F1_SOX2{dimer}.p2	BC100411|Gm5935|546282|predicted gene 5935	NM_001081657|Gm5935|546282|predicted gene 5935
mm9_v1_chr19_+_39188387_39188399	0.0831239	POU5F1_SOX2{dimer}.p2	AY227734|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	NM_001011707|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	BC147819|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	BC147824|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	AK008512|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66
mm9_v1_chr7_-_139751384_139751389	0.082948	POU5F1_SOX2{dimer}.p2	AK190000|Oat|18242|ornithine aminotransferase	AK213292|Oat|18242|ornithine aminotransferase
mm9_v1_chr14_-_49865069_49865102	0.0825637	POU5F1_SOX2{dimer}.p2	AK005866|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	BC026534|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	AK007176|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene	NM_025956|1700011H14Rik|67082|RIKEN cDNA 1700011H14 gene
mm9_v1_chr6_+_50150160_50150179	0.0815128	POU5F1_SOX2{dimer}.p2	AK047380|Mpp6|56524|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm9_v1_chr18_+_37866747_37866882	0.0811119	POU5F1_SOX2{dimer}.p2	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr9_-_42062436_42062522	0.0810206	POU5F1_SOX2{dimer}.p2	AK050439|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK165139|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr3_-_144347983_144348061	0.0804735	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr16_-_30267577_30267656	0.078958	POU5F1_SOX2{dimer}.p2	BC025836|Cpn2|71756|carboxypeptidase N, polypeptide 2	AK005049|Cpn2|71756|carboxypeptidase N, polypeptide 2	NM_027904|Cpn2|71756|carboxypeptidase N, polypeptide 2
mm9_v1_chr9_-_29770699_29770842	0.0767081	POU5F1_SOX2{dimer}.p2	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr9_-_57682040_57682040	0.0760341	POU5F1_SOX2{dimer}.p2	AF116847|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	BC145330|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	BC150755|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	NM_019689|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)
mm9_v1_chr9_+_21400165_21400200	0.0759423	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr4_-_115742546_115742551	0.074396	POU5F1_SOX2{dimer}.p2	AK028137|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr3_+_159262144_159262196	0.0743851	POU5F1_SOX2{dimer}.p2	NM_029987|Rpe65|19892|retinal pigment epithelium 65	AK020906|Rpe65|19892|retinal pigment epithelium 65	BC090656|Rpe65|19892|retinal pigment epithelium 65	BC130028|Rpe65|19892|retinal pigment epithelium 65	AF410461|Rpe65|19892|retinal pigment epithelium 65
mm9_v1_chr4_+_88487719_88487764	0.0722406	POU5F1_SOX2{dimer}.p2	BC119349|Ifna4|15967|interferon alpha 4	BC119351|Ifna4|15967|interferon alpha 4	NM_010504|Ifna4|15967|interferon alpha 4	BC116217|Ifna4|15967|interferon alpha 4
mm9_v1_chr7_-_30691111_30691122	0.0699952	POU5F1_SOX2{dimer}.p2	AK147732|Zfp27|22689|zinc finger protein 27	NM_001037707|Zfp27|22689|zinc finger protein 27	NM_011754|Zfp27|22689|zinc finger protein 27
mm9_v1_chr2_-_101489613_101489698	0.0683833	POU5F1_SOX2{dimer}.p2	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr5_+_136293975_136293975	0.0681001	POU5F1_SOX2{dimer}.p2	BC058385|Srrm3|58212|serine/arginine repetitive matrix 3	NM_021403|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr11_+_62692956_62692968	0.0656799	POU5F1_SOX2{dimer}.p2	AK050027|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr16_+_48816968_48817099	0.0644388	POU5F1_SOX2{dimer}.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr10_-_25255955_25256077	0.0640862	POU5F1_SOX2{dimer}.p2	AK008073|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene	NM_001195596|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene
mm9_v1_chr9_-_58218175_58218261	0.0623839	POU5F1_SOX2{dimer}.p2	BC132329|Tbc1d21|74286|TBC1 domain family, member 21	BC138332|Tbc1d21|74286|TBC1 domain family, member 21	BC145239|Tbc1d21|74286|TBC1 domain family, member 21	BC145240|Tbc1d21|74286|TBC1 domain family, member 21	NM_028854|Tbc1d21|74286|TBC1 domain family, member 21	BC100468|Tbc1d21|74286|TBC1 domain family, member 21	AK007086|Tbc1d21|74286|TBC1 domain family, member 21
mm9_v1_chr17_-_31281223_31281229	0.058559	POU5F1_SOX2{dimer}.p2	AK003093|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	NM_009363|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr9_-_44611033_44611045	0.0584526	POU5F1_SOX2{dimer}.p2	BC024432|Ttc36|192653|tetratricopeptide repeat domain 36	NM_138951|Ttc36|192653|tetratricopeptide repeat domain 36	BC021613|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr12_+_60196786_60196786	0.0580118	POU5F1_SOX2{dimer}.p2	AF390177|Mia2|338320|melanoma inhibitory activity 2	NM_177321|Mia2|338320|melanoma inhibitory activity 2
mm9_v1_chr4_-_49519417_49519429	0.0572371	POU5F1_SOX2{dimer}.p2	NM_007519|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr5_-_72692122_72692149	0.0548667	POU5F1_SOX2{dimer}.p2	AK005572|Corin|53419|corin
mm9_v1_chr7_-_35833597_35833632	0.0541769	POU5F1_SOX2{dimer}.p2	AK087103|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr4_+_39397325_39397476	0.0541511	POU5F1_SOX2{dimer}.p2	NM_001081095|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene	AK005799|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene	BC116915|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene	BC116917|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene
mm9_v1_chr17_-_34999068_34999191	0.0531192	POU5F1_SOX2{dimer}.p2	AK149531|Cfb|14962|complement factor B	BC005451|Cfb|14962|complement factor B	AK098094|Cfb|14962|complement factor B	AK149573|Cfb|14962|complement factor B	M57890|Cfb|14962|complement factor B	AK151246|Cfb|14962|complement factor B
mm9_v1_chr7_+_24897332_24897378	0.050446	POU5F1_SOX2{dimer}.p2	AF167319|Zfp112|57745|zinc finger protein 112	NM_021307|Zfp112|57745|zinc finger protein 112	BC120886|Zfp112|57745|zinc finger protein 112
mm9_v1_chr16_-_48772068_48772250	0.0482572	POU5F1_SOX2{dimer}.p2	BC104350|Trat1|77647|T cell receptor associated transmembrane adaptor 1	BC104351|Trat1|77647|T cell receptor associated transmembrane adaptor 1	NM_198297|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AJ297969|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK138735|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK030807|Trat1|77647|T cell receptor associated transmembrane adaptor 1
mm9_v1_chr7_-_5068497_5068512	0.0472955	POU5F1_SOX2{dimer}.p2	AY070253|Rfpl4|192658|ret finger protein-like 4	BC069834|Rfpl4|192658|ret finger protein-like 4	AK136022|Rfpl4|192658|ret finger protein-like 4	AK139569|Rfpl4|192658|ret finger protein-like 4	NM_001145013|Rfpl4|192658|ret finger protein-like 4	NM_138954|Rfpl4|192658|ret finger protein-like 4
mm9_v1_chr7_+_74792295_74792398	0.0462544	POU5F1_SOX2{dimer}.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr18_-_80560992_80560992	0.0430371	POU5F1_SOX2{dimer}.p2	NM_001190373|Kcng2|240444|potassium voltage-gated channel, subfamily G, member 2
mm9_v1_chr6_+_29820210_29820288	0.0427683	POU5F1_SOX2{dimer}.p2	AK122382|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2
mm9_v1_chr3_+_102931478_102931478	0.0425952	POU5F1_SOX2{dimer}.p2	BC060666|Dennd2c|329727|DENN/MADD domain containing 2C	NM_177857|Dennd2c|329727|DENN/MADD domain containing 2C
mm9_v1_chr3_+_84470230_84470299	0.0417232	POU5F1_SOX2{dimer}.p2	BC096432|Tmem154|320782|transmembrane protein 154	AK170385|Tmem154|320782|transmembrane protein 154	AK170665|Tmem154|320782|transmembrane protein 154	AK170626|Tmem154|320782|transmembrane protein 154
mm9_v1_chr11_+_46385014_46385159	0.0394334	POU5F1_SOX2{dimer}.p2	NM_001025435|BC053393|407814|cDNA sequence BC053393	BC052651|BC053393|407814|cDNA sequence BC053393	AK166706|BC053393|407814|cDNA sequence BC053393	AK166838|BC053393|407814|cDNA sequence BC053393	AK145729|BC053393|407814|cDNA sequence BC053393	AK140690|BC053393|407814|cDNA sequence BC053393
mm9_v1_chr10_+_90564953_90564975	0.0382213	POU5F1_SOX2{dimer}.p2	AK209988|Ikbip|67454|IKBKB interacting protein
mm9_v1_chr7_-_133727793_133727820	0.0375345	POU5F1_SOX2{dimer}.p2	NM_001146311|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC047120|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr3_-_142456600_142456910	0.0374734	POU5F1_SOX2{dimer}.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr2_+_139319648_139319745	0.035404	POU5F1_SOX2{dimer}.p2	AK054240|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078686|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	NM_175467|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078679|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3
mm9_v1_chr7_+_147404165_147404179	0.0352819	POU5F1_SOX2{dimer}.p2	AK046675|Cd163l1|244233|CD163 molecule-like 1	NM_172909|Cd163l1|244233|CD163 molecule-like 1	AK088010|Cd163l1|244233|CD163 molecule-like 1
mm9_v1_chr4_+_115236321_115236321	0.0344602	POU5F1_SOX2{dimer}.p2	NM_201640|Cyp4a31|666168|cytochrome P450, family 4, subfamily a, polypeptide 31
mm9_v1_chr13_-_73465894_73465936	0.0339547	POU5F1_SOX2{dimer}.p2	AK147147|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC076501|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC059730|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC086933|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	NM_010888|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6
mm9_v1_chr2_-_101679136_101679136	0.0264877	POU5F1_SOX2{dimer}.p2	NM_001110849|Prr5l|72446|proline rich 5 like
mm9_v1_chr10_+_61155793_61155924	0.0257685	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr4_+_143101214_143101245	0.0257075	POU5F1_SOX2{dimer}.p2	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040	BC099534|Gm13043|545693|predicted gene 13043	NM_001039595|Gm13043|545693|predicted gene 13043
mm9_v1_chr14_-_80171003_80171120	0.0238894	POU5F1_SOX2{dimer}.p2	AK140407|Pcdh8|18530|protocadherin 8	AF231125|Pcdh8|18530|protocadherin 8	BC052388|Pcdh8|18530|protocadherin 8	BC053008|Pcdh8|18530|protocadherin 8	AK048638|Pcdh8|18530|protocadherin 8	AK049982|Pcdh8|18530|protocadherin 8	NM_001042726|Pcdh8|18530|protocadherin 8	NM_021543|Pcdh8|18530|protocadherin 8
mm9_v1_chr6_-_142421335_142421382	0.0234392	POU5F1_SOX2{dimer}.p2	AK138992|Gys2|232493|glycogen synthase 2	AK149391|Gys2|232493|glycogen synthase 2
mm9_v1_chr19_-_46119403_46119446	0.0217192	POU5F1_SOX2{dimer}.p2	AF030333|Ldb1|16825|LIM domain binding 1
mm9_v1_chr13_+_33284827_33284876	0.0214464	POU5F1_SOX2{dimer}.p2	AK028382|Serpinb9d|20726|serine (or cysteine) peptidase inhibitor, clade B, member 9d	NM_011460|Serpinb9d|20726|serine (or cysteine) peptidase inhibitor, clade B, member 9d	BC139261|Serpinb9d|20726|serine (or cysteine) peptidase inhibitor, clade B, member 9d	BC139263|Serpinb9d|20726|serine (or cysteine) peptidase inhibitor, clade B, member 9d	BC100308|Serpinb9d|20726|serine (or cysteine) peptidase inhibitor, clade B, member 9d
mm9_v1_chr8_+_47254909_47254909	0.0211085	POU5F1_SOX2{dimer}.p2	BC058092|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	NM_025747|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene
mm9_v1_chr15_-_58614642_58614788	0.0210082	POU5F1_SOX2{dimer}.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr11_+_22902903_22902903	0.0205268	POU5F1_SOX2{dimer}.p2	AK194972|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)
mm9_v1_chr7_+_16481472_16481519	0.0201016	POU5F1_SOX2{dimer}.p2	AK145701|Crxos1|546024|Crx opposite strand transcript 1	NM_001033638|Crxos1|546024|Crx opposite strand transcript 1	AB472692|Crxos1|546024|Crx opposite strand transcript 1	AB472693|Crxos1|546024|Crx opposite strand transcript 1	AY593966|Crxos1|546024|Crx opposite strand transcript 1
mm9_v1_chr3_-_36512237_36512327	0.0199012	POU5F1_SOX2{dimer}.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr18_-_12914177_12914270	0.0196911	POU5F1_SOX2{dimer}.p2	AK209493|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr2_-_136213509_136213702	0.0168154	POU5F1_SOX2{dimer}.p2	AK163530|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK032593|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK079080|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK013814|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	BC099417|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK077967|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	NM_172858|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7
mm9_v1_chr4_+_133953305_133953385	0.0164802	POU5F1_SOX2{dimer}.p2	BC025495|Pafah2|100163|platelet-activating factor acetylhydrolase 2
mm9_v1_chr3_+_41546539_41546585	0.0152807	POU5F1_SOX2{dimer}.p2	AK138405|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_001099785|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_027271|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_028667|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK085404|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK012700|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK039725|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK045813|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK144064|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK044548|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	BC062244|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed
mm9_v1_chr9_-_114405661_114405661	0.0146353	POU5F1_SOX2{dimer}.p2	AK042013|Ccr4|12773|chemokine (C-C motif) receptor 4	BC117041|Ccr4|12773|chemokine (C-C motif) receptor 4	BC119171|Ccr4|12773|chemokine (C-C motif) receptor 4	NM_009916|Ccr4|12773|chemokine (C-C motif) receptor 4
mm9_v1_chr10_-_116333934_116333934	0.0141175	POU5F1_SOX2{dimer}.p2	AK144383|Gm239|237558|predicted gene 239	AK144411|Gm239|237558|predicted gene 239	NM_001033333|Gm239|237558|predicted gene 239
mm9_v1_chr3_+_87180308_87180388	0.0123081	POU5F1_SOX2{dimer}.p2	AK041750|Fcrl1|229499|Fc receptor-like 1	NM_001136236|Fcrl1|229499|Fc receptor-like 1	NM_153090|Fcrl1|229499|Fc receptor-like 1	NM_178165|Fcrl1|229499|Fc receptor-like 1	AK038494|Fcrl1|229499|Fc receptor-like 1	AK156528|Fcrl1|229499|Fc receptor-like 1	AK156985|Fcrl1|229499|Fc receptor-like 1	AY506554|Fcrl1|229499|Fc receptor-like 1	AY506555|Fcrl1|229499|Fc receptor-like 1	AF329485|Fcrl1|229499|Fc receptor-like 1	BC055830|Fcrl1|229499|Fc receptor-like 1	AY158088|Fcrl1|229499|Fc receptor-like 1	AY158089|Fcrl1|229499|Fc receptor-like 1
mm9_v1_chr12_-_104895293_104895303	0.0118256	POU5F1_SOX2{dimer}.p2	BC013632|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr14_-_51405130_51405204	0.0111675	POU5F1_SOX2{dimer}.p2	BC003272|Ttc5|219022|tetratricopeptide repeat domain 5	BC025610|Ttc5|219022|tetratricopeptide repeat domain 5	AK077874|Ttc5|219022|tetratricopeptide repeat domain 5	BC092074|Ttc5|219022|tetratricopeptide repeat domain 5	AK081214|Ttc5|219022|tetratricopeptide repeat domain 5	AK161279|Ttc5|219022|tetratricopeptide repeat domain 5	AK157777|Ttc5|219022|tetratricopeptide repeat domain 5	AK133953|Ttc5|219022|tetratricopeptide repeat domain 5	BC069946|Ttc5|219022|tetratricopeptide repeat domain 5	AK044781|Ttc5|219022|tetratricopeptide repeat domain 5	NM_001080949|Ttc5|219022|tetratricopeptide repeat domain 5	NM_177625|Ttc5|219022|tetratricopeptide repeat domain 5
mm9_v1_chr13_+_67880629_67880739	0.0106311	POU5F1_SOX2{dimer}.p2	NM_028402|Zfp493|72958|zinc finger protein 493	AK013687|Zfp493|72958|zinc finger protein 493	AK140336|Zfp493|72958|zinc finger protein 493
mm9_v1_chr2_+_101464874_101464960	0.00951795	POU5F1_SOX2{dimer}.p2	AK089075|Rag2|19374|recombination activating gene 2	AK031014|Rag2|19374|recombination activating gene 2	AK040375|Rag2|19374|recombination activating gene 2	NM_009020|Rag2|19374|recombination activating gene 2	BC120548|Rag2|19374|recombination activating gene 2	BC125473|Rag2|19374|recombination activating gene 2	BC144856|Rag2|19374|recombination activating gene 2	M64796|Rag2|19374|recombination activating gene 2
mm9_v1_chr6_-_85770936_85770965	0.00604833	POU5F1_SOX2{dimer}.p2	BC024605|Cml5|69049|camello-like 5	BC014696|Cml3|93674|camello-like 3	AK007530|Cml5|69049|camello-like 5	NM_023493|Cml5|69049|camello-like 5
mm9_v1_chr3_+_19408594_19408651	0.00510975	POU5F1_SOX2{dimer}.p2	NM_001163536|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	NM_025489|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AK005725|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AK005749|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC049579|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
mm9_v1_chr6_-_122287014_122287032	0.00196298	POU5F1_SOX2{dimer}.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
